Gm30190 Gene Detail

Summary

• Symbol
  Gm30190
• Name
  predicted gene, 30190

• Feature Type
  lncRNA gene
• IDs
  MGI:5589349
  NCBI Gene: 102632009
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:66806085-66807653 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589349	lncRNA gene	Chr18:66769894-66807947 (-)
129S1/SvImJ	ENSMUSG00200025727	lncRNA gene	Chr18:63963768-64001508 (-)
A/J	ENSMUSG00195033893	lncRNA gene	Chr18:63997403-64035161 (-)
AKR/J	ENSMUSG00220023241	lncRNA gene	Chr18:63987117-64024623 (-)
BALB/cJ	ENSMUSG00180012294	lncRNA gene	Chr18:64564354-64602102 (-)
C3H/HeJ	ENSMUSG00175010734	lncRNA gene	Chr18:64180969-64218705 (-)
C57BL/6NJ	ENSMUSG00215022579	lncRNA gene	Chr18:63511541-63549310 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015877	lncRNA gene	Chr18:63184404-63225648 (-)
CBA/J	ENSMUSG00210032057	lncRNA gene	Chr18:64133991-64171725 (-)
DBA/2J	ENSMUSG00185031616	lncRNA gene	Chr18:64045309-64083030 (-)
FVB/NJ	ENSMUSG00205013395	lncRNA gene	Chr18:63517781-63554669 (-)
JF1/MsJ	ENSUMUG00000041559	lncRNA gene	Chr18:63961853-63999492 (-)
LP/J	ENSMUSG00230039163	lncRNA gene	Chr18:66096305-66134054 (-)
NOD/ShiLtJ	ENSMUSG00190008178	lncRNA gene	Chr18:63777111-63814608 (-)
NZO/HlLtJ	ENSMUSG00225030347	lncRNA gene	Chr18:65987739-66025438 (-)
PWK/PhJ	ENSLUMG00010026399	lncRNA gene	Chr18:64359351-64397221 (-)
SPRET/EiJ	ENSMSPG00010040152	lncRNA gene	Chr18:64495375-64527502 (-)
WSB/EiJ	ENSIUOG00005006612	lncRNA gene	Chr18:63561635-63599394 (-)

Homology

• Gene Tree
  Gm30190
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  1

• Ensembl
  ENSMUSG00000117750 (Evidence)
• NCBI Gene
  102632009

Representative Sequences			Length	Strain/Species
genomic	102632009	NCBI Gene Model | MGI Sequence Detail	1569	C57BL/6J
transcript	XR_386295	RefSeq | MGI Sequence Detail	307	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm30190:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153744	Chr18:66807570-66807583 (-)	76 bp