Gm30165 Gene Detail

Summary

• Symbol
  Gm30165
• Name
  predicted gene, 30165

• Feature Type
  lncRNA gene
• IDs
  MGI:5589324
  NCBI Gene: 102631969
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:27507978-27547762 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1263 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589324	lncRNA gene	Chr10:27507978-27574323 (-)
129S1/SvImJ	ENSMUSG00200010180	lncRNA gene	Chr10:24339561-24391639 (-)
A/J	ENSMUSG00195015219	lncRNA gene	Chr10:24642000-24694101 (-)
AKR/J	ENSMUSG00220011896	lncRNA gene	Chr10:24323484-24375570 (-)
BALB/cJ	ENSMUSG00180018906	lncRNA gene	Chr10:24770741-24822837 (-)
C3H/HeJ	ENSMUSG00175025892	lncRNA gene	Chr10:24438880-24490961 (-)
C57BL/6NJ	ENSMUSG00215015299	lncRNA gene	Chr10:24318409-24370485 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014810	lncRNA gene	Chr10:24130729-24182331 (-)
CBA/J	ENSMUSG00210023752	lncRNA gene	Chr10:24428718-24480688 (-)
DBA/2J	ENSMUSG00185007538	lncRNA gene	Chr10:24600807-24652771 (-)
FVB/NJ	ENSMUSG00205011182	lncRNA gene	Chr10:24579802-24638102 (-)
JF1/MsJ	ENSUMUG00000018773	lncRNA gene	Chr10:24381324-24431327 (-)
LP/J	ENSMUSG00230012302	lncRNA gene	Chr10:26373945-26426027 (-)
NOD/ShiLtJ	ENSMUSG00190015305	lncRNA gene	Chr10:24728787-24780836 (-)
NZO/HlLtJ	ENSMUSG00225034483	lncRNA gene	Chr10:30632828-30684926 (-)
PWK/PhJ	ENSLUMG00010010668	lncRNA gene	Chr10:24257497-24308920 (-)
SPRET/EiJ	ENSMSPG00010015574	lncRNA gene	Chr10:25073734-25138021 (-)
WSB/EiJ	ENSIUOG00005031525	lncRNA gene	Chr10:24032864-24084866 (-)

Homology

• Gene Tree
  Gm30165
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30165
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000112610 (Evidence)
• NCBI Gene
  102631969

Representative Sequences			Length	Strain/Species
genomic	102631969	NCBI Gene Model | MGI Sequence Detail	39785	C57BL/6J
transcript	XR_001779687	RefSeq | MGI Sequence Detail	350	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87