Gm30162 Gene Detail

Summary

• Symbol
  Gm30162
• Name
  predicted gene, 30162

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5589321
  NCBI Gene: 102631966
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:75471951-75499902 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  782 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589321	lncRNA gene	Chr16:75456244-75499902 (+)
129S1/SvImJ	ENSMUSG00200016264	pseudogene	Chr16:72322587-72380884 (+)
A/J	ENSMUSG00195023694	pseudogene	Chr16:72104715-72164551 (+)
AKR/J	ENSMUSG00220017968	pseudogene	Chr16:72278075-72336335 (+)
BALB/cJ	ENSMUSG00180002096	pseudogene	Chr16:72179629-72237916 (+)
C3H/HeJ	ENSMUSG00175009042	pseudogene	Chr16:72453043-72511313 (+)
C57BL/6NJ	ENSMUSG00215001739	pseudogene	Chr16:72287536-72345809 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007916	pseudogene	Chr16:72201035-72252351 (+)
CBA/J	ENSMUSG00210020084	pseudogene	Chr16:72407929-72466197 (+)
DBA/2J	ENSMUSG00185005130	pseudogene	Chr16:72339610-72399446 (+)
FVB/NJ	ENSMUSG00205015113	pseudogene	Chr16:72136463-72194717 (+)
JF1/MsJ	ENSUMUG00000014900	pseudogene	Chr16:72558057-72610314 (+)
LP/J	ENSMUSG00230019864	pseudogene	Chr16:74896355-74954642 (+)
NOD/ShiLtJ	ENSMUSG00190011634	pseudogene	Chr16:72323500-72381765 (+)
NZO/HlLtJ	ENSMUSG00225029556	pseudogene	Chr16:78135317-78195149 (+)
PWK/PhJ	ENSLUMG00010005390	pseudogene	Chr16:72219126-72270645 (+)
SPRET/EiJ	ENSMSPG00010015558	pseudogene	Chr16:73050235-73111208 (+)
WSB/EiJ	ENSIUOG00005017991	pseudogene	Chr16:72346735-72405015 (+)

Homology

• Gene Tree
  Gm30162
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  1
• Genomic Mutations
  2 involving Gm30162
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116643 (Evidence)
• NCBI Gene
  102631966

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116643	Ensembl Gene Model | MGI Sequence Detail	27952	C57BL/6J
transcript	ENSMUST00000239086	Ensembl | MGI Sequence Detail	827	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:361105 Tateossian H, et al., DYRK1A kinase triplication is the major cause of Otitis Media in Down Syndrome. Elife. 2025;