Gm30054 Gene Detail

Summary

• Symbol
  Gm30054
• Name
  predicted gene, 30054

• Feature Type
  lncRNA gene
• IDs
  MGI:5589213
  NCBI Gene: 102631812
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:20414317-20419383 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589213	lncRNA gene	Chr14:20414317-20429433 (-)
129S1/SvImJ	ENSMUSG00200015606	lncRNA gene	Chr14:12193086-12207400 (-)
A/J	ENSMUSG00195022366	lncRNA gene	Chr14:13287185-13301495 (-)
AKR/J	ENSMUSG00220027907	lncRNA gene	Chr14:12417697-12432007 (-)
BALB/cJ	ENSMUSG00180040919	lncRNA gene	Chr14:12382097-12396410 (-)
C3H/HeJ	ENSMUSG00175023522	lncRNA gene	Chr14:12443097-12457407 (-)
C57BL/6NJ	ENSMUSG00215034057	lncRNA gene	Chr14:12632697-12647007 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031647	lncRNA gene	Chr14:12560153-12574311 (-)
CBA/J	ENSMUSG00210027192	lncRNA gene	Chr14:12666191-12680506 (-)
DBA/2J	ENSMUSG00185041427	lncRNA gene	Chr14:16951267-16965580 (-)
FVB/NJ	ENSMUSG00205042263	lncRNA gene	Chr14:12506800-12521113 (-)
JF1/MsJ	ENSUMUG00000046194	lncRNA gene	Chr14:24166835-24181250 (-)
LP/J	ENSMUSG00230041035	lncRNA gene	Chr14:24233063-24247376 (-)
NOD/ShiLtJ	ENSMUSG00190039047	lncRNA gene	Chr14:12665125-12679436 (-)
NZO/HlLtJ	ENSMUSG00225036733	lncRNA gene	Chr14:18468614-18482936 (-)
PWK/PhJ	ENSLUMG00010022047	lncRNA gene	Chr14:746479-760789 (-)
SPRET/EiJ	ENSMSPG00010031378	lncRNA gene	Chr14:14295502-14309895 (-)
WSB/EiJ	ENSIUOG00005033023	lncRNA gene	Chr14:12489748-12504051 (-)

Homology

• Gene Tree
  Gm30054
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000114937 (Evidence)
• NCBI Gene
  102631812

Representative Sequences			Length	Strain/Species
genomic	102631812	NCBI Gene Model | MGI Sequence Detail	5067	C57BL/6J
transcript	XR_383232	RefSeq | MGI Sequence Detail	4918	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;