Gm30023 Pseudogene Detail

Summary

• Symbol
  Gm30023
• Name
  predicted gene, 30023

• Feature Type
  pseudogene
• IDs
  MGI:5589182
  NCBI Gene: 118568641
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:94360476-94361364 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589182	pseudogene	Chr3:94360476-94361407 (+)
129S1/SvImJ	ENSMUSG00200040166	pseudogene	Chr3:91023964-91024868 (+)
A/J	ENSMUSG00195049864	pseudogene	Chr3:91351238-91352129 (+)
AKR/J	ENSMUSG00220051429	pseudogene	Chr3:89738339-89739244 (+)
BALB/cJ	ENSMUSG00180041455	pseudogene	Chr3:91333009-91333905 (+)
C3H/HeJ	ENSMUSG00175029863	pseudogene	Chr3:90994967-90995857 (+)
C57BL/6NJ	ENSMUSG00215036907	pseudogene	Chr3:91704771-91705661 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010964	pseudogene	Chr3:88630446-88631318 (+)
CAST/EiJ	ENSTCUG00005048546	pseudogene	Chr3:91541371-91542273 (+)
CBA/J	ENSMUSG00210051476	pseudogene	Chr3:91532462-91533355 (+)
DBA/2J	ENSMUSG00185046840	pseudogene	Chr3:91848508-91849397 (+)
FVB/NJ	ENSMUSG00205051525	pseudogene	Chr3:90703181-90704086 (+)
JF1/MsJ	ENSUMUG00000053588	pseudogene	Chr3:90846209-90847099 (+)
LP/J	ENSMUSG00230045256	pseudogene	Chr3:93887494-93888397 (+)
NOD/ShiLtJ	ENSMUSG00190046839	pseudogene	Chr3:92006847-92007739 (+)
NZO/HlLtJ	ENSMUSG00225012417	pseudogene	Chr3:96294686-96295576 (+)
PWK/PhJ	ENSLUMG00010052996	pseudogene	Chr3:90826375-90827265 (+)
SPRET/EiJ	ENSMSPG00010048113	pseudogene	Chr3:91139163-91140033 (+)
WSB/EiJ	ENSIUOG00005032657	pseudogene	Chr3:91464369-91465261 (+)

Homology

• Gene Tree
  Gm30023
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm30023
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000104695 (Evidence)
• NCBI Gene
  118568641

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104695	Ensembl Gene Model | MGI Sequence Detail	889	C57BL/6J
transcript	ENSMUST00000197970	Ensembl | MGI Sequence Detail	889	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426