Gm29926 Gene Detail

Summary

• Symbol
  Gm29926
• Name
  predicted gene, 29926

• Feature Type
  lncRNA gene
• IDs
  MGI:5589085
  NCBI Gene: 102631634
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:116947099-116952186 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  332 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589085	lncRNA gene	Chr5:116947093-116952186 (+)
129S1/SvImJ	ENSMUSG00200023942	lncRNA gene	Chr5:110704758-110707321 (+)
A/J	ENSMUSG00195041075	lncRNA gene	Chr5:110218300-110220863 (+)
AKR/J	ENSMUSG00220052574	lncRNA gene	Chr5:109719040-109721603 (+)
BALB/cJ	ENSMUSG00180047481	lncRNA gene	Chr5:110340077-110342640 (+)
C3H/HeJ	ENSMUSG00175033119	lncRNA gene	Chr5:112329441-112332102 (+)
C57BL/6NJ	ENSMUSG00215038404	lncRNA gene	Chr5:110352030-110354693 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006169	lincRNA gene	Chr5:109765068-109768194 (+)
CAST/EiJ	ENSTCUG00005034411	lncRNA gene	Chr5:109527359-109529905 (+)
CBA/J	ENSMUSG00210046344	lncRNA gene	Chr5:111080476-111083137 (+)
DBA/2J	ENSMUSG00185055623	lncRNA gene	Chr5:114146435-114148996 (+)
FVB/NJ	ENSMUSG00205052260	lncRNA gene	Chr5:109986176-109988770 (+)
JF1/MsJ	ENSUMUG00000053653	lncRNA gene	Chr5:116966792-116969395 (+)
LP/J	ENSMUSG00230049597	lncRNA gene	Chr5:118227322-118229885 (+)
NOD/ShiLtJ	ENSMUSG00190050456	lncRNA gene	Chr5:110019059-110021653 (+)
NZO/HlLtJ	ENSMUSG00225017031	lncRNA gene	Chr5:125895850-125898413 (+)
PWK/PhJ	ENSLUMG00010041828	lncRNA gene	Chr5:108863547-108866107 (+)
SPRET/EiJ	ENSMSPG00010047442	lncRNA gene	Chr5:112156064-112158614 (+)
WSB/EiJ	ENSIUOG00005044624	lncRNA gene	Chr5:112714431-112716994 (+)

Homology

• Gene Tree
  Gm29926
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29926
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000107237 (Evidence)
• NCBI Gene
  102631634

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107237	Ensembl Gene Model | MGI Sequence Detail	5088	C57BL/6J
transcript	ENSMUST00000201443	Ensembl | MGI Sequence Detail	1268	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17