Gm29824 Gene Detail

Summary

• Symbol
  Gm29824
• Name
  predicted gene, 29824

• Feature Type
  lncRNA gene
• IDs
  MGI:5588983
  NCBI Gene: 102631501
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:24687020-24707190 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  632 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588983	lncRNA gene	Chr9:24687020-24727752 (+)
129S1/SvImJ	ENSMUSG00200008517	lncRNA gene	Chr9:21664597-21694146 (+)
A/J	ENSMUSG00195006554	lncRNA gene	Chr9:21481022-21510580 (+)
AKR/J	ENSMUSG00220010957	lncRNA gene	Chr9:21479955-21509519 (+)
BALB/cJ	ENSMUSG00180006791	lncRNA gene	Chr9:21615224-21644789 (+)
C3H/HeJ	ENSMUSG00175019636	lncRNA gene	Chr9:21591684-21621252 (+)
C57BL/6NJ	ENSMUSG00215009376	lncRNA gene	Chr9:21576984-21606544 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019400	lncRNA gene	Chr9:21571855-21601470 (+)
CBA/J	ENSMUSG00210022197	lncRNA gene	Chr9:21606982-21636567 (+)
DBA/2J	ENSMUSG00185002839	lncRNA gene	Chr9:21673846-21703409 (+)
FVB/NJ	ENSMUSG00205004528	lncRNA gene	Chr9:21930490-21960085 (+)
JF1/MsJ	ENSUMUG00000015163	lncRNA gene	Chr9:21781390-21811019 (+)
LP/J	ENSMUSG00230005406	lncRNA gene	Chr9:22073697-22103255 (+)
NOD/ShiLtJ	ENSMUSG00190006219	lncRNA gene	Chr9:21627498-21657099 (+)
NZO/HlLtJ	ENSMUSG00225015078	lncRNA gene	Chr9:22057167-22086757 (+)
PWK/PhJ	ENSLUMG00010009366	lncRNA gene	Chr9:21668933-21698424 (+)
SPRET/EiJ	ENSMSPG00010002239	lncRNA gene	Chr9:21951330-21980652 (+)
WSB/EiJ	ENSIUOG00005015821	lncRNA gene	Chr9:21151038-21180633 (+)

Homology

• Gene Tree
  Gm29824
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  2

• Ensembl
  ENSMUSG00000111275 (Evidence)
• NCBI Gene
  102631501

Representative Sequences			Length	Strain/Species
genomic	102631501	NCBI Gene Model | MGI Sequence Detail	20171	C57BL/6J
transcript	AK052870	GenBank | ENA | DDBJ | MGI Sequence Detail	3285	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;