Gm29823 Gene Detail

Summary

• Symbol
  Gm29823
• Name
  predicted gene, 29823

• Feature Type
  lncRNA gene
• IDs
  MGI:5588982
  NCBI Gene: 102631500
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:70752373-70808082 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1721 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588982	lncRNA gene	Chr16:70751172-70808090 (+)
129S1/SvImJ	ENSMUSG00200008356	lncRNA gene	Chr16:67619742-67679540 (+)
A/J	ENSMUSG00195001590	lncRNA gene	Chr16:67336505-67396314 (+)
AKR/J	ENSMUSG00220005669	lncRNA gene	Chr16:67635101-67694907 (+)
BALB/cJ	ENSMUSG00180001741	lncRNA gene	Chr16:67475460-67535271 (+)
C3H/HeJ	ENSMUSG00175004633	lncRNA gene	Chr16:67747108-67806912 (+)
C57BL/6NJ	ENSMUSG00215014577	lncRNA gene	Chr16:67594011-67650647 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012684	lncRNA gene	Chr16:67570198-67619470 (+)
CBA/J	ENSMUSG00210015209	lncRNA gene	Chr16:67704416-67764227 (+)
DBA/2J	ENSMUSG00185004575	lncRNA gene	Chr16:67640364-67700172 (+)
FVB/NJ	ENSMUSG00205011766	lncRNA gene	Chr16:67347354-67407200 (+)
JF1/MsJ	ENSUMUG00000016463	lncRNA gene	Chr16:67842141-67891451 (+)
LP/J	ENSMUSG00230007758	lncRNA gene	Chr16:70205716-70265513 (+)
NOD/ShiLtJ	ENSMUSG00190016411	lncRNA gene	Chr16:67686725-67737067 (+)
NZO/HlLtJ	ENSMUSG00225029803	lncRNA gene	Chr16:73441629-73501433 (+)
PWK/PhJ	ENSLUMG00010011568	lncRNA gene	Chr16:67511660-67560797 (+)
SPRET/EiJ	ENSMSPG00010002082	lncRNA gene	Chr16:68240428-68298681 (+)
WSB/EiJ	ENSIUOG00005002337	lncRNA gene	Chr16:67755011-67814861 (+)

Homology

• Gene Tree
  Gm29823
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm29823
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000116800 (Evidence)
• NCBI Gene
  102631500

Representative Sequences			Length	Strain/Species
genomic	102631500	NCBI Gene Model | MGI Sequence Detail	55710	C57BL/6J
transcript	XR_384957	RefSeq | MGI Sequence Detail	784	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76