Gm29817 Pseudogene Detail

Summary

• Symbol
  Gm29817
• Name
  predicted gene, 29817

• Feature Type
  pseudogene
• IDs
  MGI:5588976
  NCBI Gene: 102238522
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:99605358-99605529 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588976	pseudogene	Chr8:99605123-99605587 (-)
129S1/SvImJ	ENSMUSG00200015457	pseudogene	Chr8:93996500-93996671 (-)
A/J	ENSMUSG00195004358	pseudogene	Chr8:94295523-94295694 (-)
AKR/J	ENSMUSG00220011971	pseudogene	Chr8:94355535-94355706 (-)
BALB/cJ	ENSMUSG00180004335	pseudogene	Chr8:94215908-94216079 (-)
C3H/HeJ	ENSMUSG00175002841	pseudogene	Chr8:94298017-94298188 (-)
C57BL/6NJ	ENSMUSG00215001421	pseudogene	Chr8:93878463-93878634 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024155	pseudogene	Chr8:93690813-93690984 (-)
CBA/J	ENSMUSG00210015484	pseudogene	Chr8:94226988-94227159 (-)
DBA/2J	ENSMUSG00185025272	pseudogene	Chr8:100335873-100336044 (-)
FVB/NJ	ENSMUSG00205017610	pseudogene	Chr8:93281047-93281218 (-)
JF1/MsJ	ENSUMUG00000017007	pseudogene	Chr8:102668753-102668924 (-)
LP/J	ENSMUSG00230008628	pseudogene	Chr8:103953509-103953680 (-)
NOD/ShiLtJ	ENSMUSG00190013191	pseudogene	Chr8:94353323-94353494 (-)
NZO/HlLtJ	ENSMUSG00225011814	pseudogene	Chr8:107365935-107366106 (-)
PWK/PhJ	ENSLUMG00010004199	pseudogene	Chr8:94147137-94147308 (-)
SPRET/EiJ	ENSMSPG00010006593	pseudogene	Chr8:96202151-96202322 (-)
WSB/EiJ	ENSIUOG00005006335	pseudogene	Chr8:95010846-95011017 (-)

Homology

• Gene Tree
  Gm29817
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110011 (Evidence)
• NCBI Gene
  102238522

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110011	Ensembl Gene Model | MGI Sequence Detail	172	C57BL/6J
transcript	ENSMUST00000210098	Ensembl | MGI Sequence Detail	172	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;