Gm29807 Pseudogene Detail

Summary

• Symbol
  Gm29807
• Name
  predicted gene, 29807

• Feature Type
  pseudogene
• IDs
  MGI:5588966
  NCBI Gene: 101056238
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:88508884-88509255 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588966	pseudogene	Chr10:88508881-88509255 (+)
129S1/SvImJ	ENSMUSG00200031179	pseudogene	Chr10:85006858-85007229 (+)
A/J	ENSMUSG00195022564	pseudogene	Chr10:85451683-85452054 (+)
AKR/J	ENSMUSG00220023011	pseudogene	Chr10:85058176-85058547 (+)
BALB/cJ	ENSMUSG00180033455	pseudogene	Chr10:85454683-85455054 (+)
C3H/HeJ	ENSMUSG00175023120	pseudogene	Chr10:85341541-85341912 (+)
C57BL/6NJ	ENSMUSG00215033979	pseudogene	Chr10:85009475-85009846 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035249	pseudogene	Chr10:84730633-84731022 (+)
CBA/J	ENSMUSG00210036210	pseudogene	Chr10:85181990-85182361 (+)
DBA/2J	ENSMUSG00185044895	pseudogene	Chr10:85411583-85411954 (+)
FVB/NJ	ENSMUSG00205022112	pseudogene	Chr10:85033079-85033450 (+)
JF1/MsJ	ENSUMUG00000029284	pseudogene	Chr10:86749655-86750040 (+)
LP/J	ENSMUSG00230018407	pseudogene	Chr10:87297755-87298126 (+)
NOD/ShiLtJ	ENSMUSG00190018215	pseudogene	Chr10:85436895-85437266 (+)
NZO/HlLtJ	ENSMUSG00225053728	pseudogene	Chr10:91560217-91560588 (+)
PWK/PhJ	ENSLUMG00010023193	pseudogene	Chr10:85038525-85038910 (+)
SPRET/EiJ	ENSMSPG00010033643	pseudogene	Chr10:86555550-86555935 (+)
WSB/EiJ	ENSIUOG00005037659	pseudogene	Chr10:85136490-85136861 (+)

Homology

• Gene Tree
  Gm29807
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Transposon induced
  1
• Genomic Mutations
  2 involving Gm29807
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000112885 (Evidence)
• NCBI Gene
  101056238

Representative Sequences			Length	Strain/Species
genomic	101056238	NCBI Gene Model | MGI Sequence Detail	372	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87