Gm29799 Pseudogene Detail

Summary

• Symbol
  Gm29799
• Name
  predicted gene, 29799

• Feature Type
  pseudogene
• IDs
  MGI:5588958
  NCBI Gene: 101056211
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:140364428-140364914 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588958	pseudogene	Chr7:140364428-140364914 (+)
129S1/SvImJ	ENSMUSG00200046834	pseudogene	Chr7:126929162-126929648 (+)
A/J	ENSMUSG00195041073	pseudogene	Chr7:131411587-131412073 (+)
AKR/J	ENSMUSG00220037498	pseudogene	Chr7:124883194-124883680 (+)
BALB/cJ	ENSMUSG00180043431	pseudogene	Chr7:128103761-128104247 (+)
C3H/HeJ	ENSMUSG00175046019	pseudogene	Chr7:128832072-128832558 (+)
C57BL/6NJ	ENSMUSG00215048054	pseudogene	Chr7:128098615-128099101 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012294	pseudogene	Chr7:142981471-142981948 (+)
CAST/EiJ	ENSTCUG00005051860	pseudogene	Chr7:131405063-131405538 (+)
CBA/J	ENSMUSG00210031713	pseudogene	Chr7:128590810-128591290 (+)
DBA/2J	ENSMUSG00185017621	pseudogene	Chr7:132868630-132869116 (+)
FVB/NJ	ENSMUSG00205047321	pseudogene	Chr7:128510887-128511373 (+)
JF1/MsJ	ENSUMUG00000050445	pseudogene	Chr7:137945119-137945593 (+)
LP/J	ENSMUSG00230043065	pseudogene	Chr7:139032136-139032622 (+)
NOD/ShiLtJ	ENSMUSG00190033229	pseudogene	Chr7:128697541-128698027 (+)
NZO/HlLtJ	ENSMUSG00225052300	pseudogene	Chr7:137241371-137241857 (+)
PWK/PhJ	ENSLUMG00010047645	pseudogene	Chr7:127076054-127076528 (+)
SPRET/EiJ	ENSMSPG00010043751	pseudogene	Chr7:128516242-128516719 (+)
WSB/EiJ	ENSIUOG00005037316	pseudogene	Chr7:129432017-129432503 (+)

Homology

• Gene Tree
  Gm29799
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm29799
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000107816 (Evidence)
• NCBI Gene
  101056211

Representative Sequences			Length	Strain/Species
genomic	101056211	NCBI Gene Model | MGI Sequence Detail	487	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
• Latest
  J:187438 Peters J, et al., Identification and characterisation of imprinted genes in the mouse. Brief Funct Genomic Proteomic. 2004 Feb;2(4):320-33