Gm29787 Pseudogene Detail

Summary

• Symbol
  Gm29787
• Name
  predicted gene, 29787

• Feature Type
  pseudogene
• IDs
  MGI:5588946
  NCBI Gene: 101056142
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:51359299-51360147 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588946	pseudogene	Chr13:51359275-51431262 (-)
129S1/SvImJ	ENSMUSG00200036679	pseudogene	Chr13:48218642-48219490 (-)
A/J	ENSMUSG00195030942	pseudogene	Chr13:47688825-47689673 (-)
AKR/J	ENSMUSG00220009963	pseudogene	Chr13:47259047-47259895 (-)
BALB/cJ	ENSMUSG00180008643	pseudogene	Chr13:47938543-47939391 (-)
C3H/HeJ	ENSMUSG00175032038	pseudogene	Chr13:47721647-47722495 (-)
C57BL/6NJ	ENSMUSG00215006611	pseudogene	Chr13:47757907-47758755 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033782	pseudogene	Chr13:48132984-48133859 (-)
CBA/J	ENSMUSG00210028281	pseudogene	Chr13:47931868-47932716 (-)
DBA/2J	ENSMUSG00185031928	pseudogene	Chr13:48780818-48781666 (-)
FVB/NJ	ENSMUSG00205012391	pseudogene	Chr13:47586708-47587556 (-)
JF1/MsJ	ENSUMUG00000020061	pseudogene	Chr13:48186729-48187577 (-)
LP/J	ENSMUSG00230029375	pseudogene	Chr13:58101543-58102391 (-)
NOD/ShiLtJ	ENSMUSG00190012198	pseudogene	Chr13:47816074-47816922 (-)
NZO/HlLtJ	ENSMUSG00225035464	pseudogene	Chr13:51851957-51852805 (-)
PWK/PhJ	ENSLUMG00010021267	pseudogene	Chr13:47042910-47043758 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005028100	pseudogene	Chr13:47213508-47214356 (-)

Homology

• Gene Tree
  Gm29787
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm29787
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113521 (Evidence)
• NCBI Gene
  101056142

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113521	Ensembl Gene Model | MGI Sequence Detail	849	C57BL/6J
transcript	ENSMUST00000222129	Ensembl | MGI Sequence Detail	849	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22