Gm29778 Pseudogene Detail

Summary

• Symbol
  Gm29778
• Name
  predicted gene, 29778

• Feature Type
  pseudogene
• IDs
  MGI:5588937
  NCBI Gene: 101056097
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:147262679-147263144 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588937	pseudogene	Chr5:147262679-147263180 (-)
129S1/SvImJ	ENSMUSG00200041875	pseudogene	Chr5:141094276-141094741 (-)
A/J	ENSMUSG00195046026	pseudogene	Chr5:140702284-140702749 (-)
AKR/J	ENSMUSG00220024158	pseudogene	Chr5:139706819-139707284 (-)
BALB/cJ	ENSMUSG00180034728	pseudogene	Chr5:141084761-141085226 (-)
C3H/HeJ	ENSMUSG00175011908	pseudogene	Chr5:142925630-142926095 (-)
C57BL/6NJ	ENSMUSG00215041030	pseudogene	Chr5:140652239-140652704 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011784	pseudogene	Chr5:140910617-140911062 (-)
CAST/EiJ	ENSTCUG00005036174	pseudogene	Chr5:140223220-140223684 (-)
CBA/J	ENSMUSG00210001022	pseudogene	Chr5:141842775-141843240 (-)
DBA/2J	ENSMUSG00185043228	pseudogene	Chr5:144813992-144814457 (-)
FVB/NJ	ENSMUSG00205044646	pseudogene	Chr5:140461110-140461575 (-)
JF1/MsJ	ENSUMUG00000052167	pseudogene	Chr5:147303680-147304128 (-)
LP/J	ENSMUSG00230030812	pseudogene	Chr5:148811146-148811611 (-)
NOD/ShiLtJ	ENSMUSG00190047568	pseudogene	Chr5:140456150-140456615 (-)
NZO/HlLtJ	ENSMUSG00225009102	pseudogene	Chr5:156557835-156558300 (-)
PWK/PhJ	ENSLUMG00010021507	pseudogene	Chr5:139540669-139541117 (-)
SPRET/EiJ	ENSMSPG00010006522	pseudogene	Chr5:142346693-142347149 (-)
WSB/EiJ	ENSIUOG00005014335	pseudogene	Chr5:143233876-143234341 (-)

Homology

• Gene Tree
  Gm29778
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000106939 (Evidence)
• NCBI Gene
  101056097

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106939	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00000201667	Ensembl | MGI Sequence Detail	466	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm29778:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr54516	Chr5:147263166-147263191 (-)	-35 bp