Gm29753 Pseudogene Detail

Summary

• Symbol
  Gm29753
• Name
  predicted gene, 29753

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5588912
  NCBI Gene: 101055956
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:15943517-15944001 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588912	pseudogene	Chr15:15943110-15944086 (+)
129S1/SvImJ	ENSMUSG00200004341	pseudogene	Chr15:12966292-12966776 (+)
A/J	ENSMUSG00195011601	pseudogene	Chr15:12844820-12845304 (+)
AKR/J	ENSMUSG00220001700	pseudogene	Chr15:12764635-12765119 (+)
BALB/cJ	ENSMUSG00180009913	pseudogene	Chr15:12856851-12857335 (+)
C3H/HeJ	ENSMUSG00175001984	pseudogene	Chr15:13013845-13014329 (+)
C57BL/6NJ	ENSMUSG00215008891	pseudogene	Chr15:12881583-12882067 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002649	pseudogene	Chr15:12978172-12978656 (+)
CBA/J	ENSMUSG00210004840	pseudogene	Chr15:13005468-13005952 (+)
DBA/2J	ENSMUSG00185003472	pseudogene	Chr15:12954608-12955092 (+)
FVB/NJ	ENSMUSG00205010618	pseudogene	Chr15:12829450-12829934 (+)
JF1/MsJ	ENSUMUG00000014430	pseudogene	Chr15:13008997-13009481 (+)
LP/J	ENSMUSG00230016425	pseudogene	Chr15:16440736-16441220 (+)
NOD/ShiLtJ	ENSMUSG00190002032	pseudogene	Chr15:12903016-12903500 (+)
NZO/HlLtJ	ENSMUSG00225024282	pseudogene	Chr15:16641421-16641905 (+)
PWK/PhJ	ENSLUMG00010015042	pseudogene	Chr15:13104819-13105303 (+)
SPRET/EiJ	ENSMSPG00010001031	pseudogene	Chr15:13249540-13250024 (+)
WSB/EiJ	ENSIUOG00005012042	pseudogene	Chr15:12912479-12912963 (+)

Homology

• Gene Tree
  Gm29753
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000115633 (Evidence)
• NCBI Gene
  101055956

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115633	Ensembl Gene Model | MGI Sequence Detail	485	C57BL/6J
transcript	ENSMUST00000226265	Ensembl | MGI Sequence Detail	485	Not Applicable
polypeptide	XP_036015577	RefSeq | MGI Sequence Detail	202	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;