Gm29748 Pseudogene Detail

Summary

• Symbol
  Gm29748
• Name
  predicted gene, 29748

• Feature Type
  pseudogene
• IDs
  MGI:5588907
  NCBI Gene: 101055941
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:40863489-40863746 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588907	pseudogene	Chr17:40863382-40863792 (+)
129S1/SvImJ	ENSMUSG00200051850	pseudogene	Chr17:36016283-36016540 (+)
A/J	ENSMUSG00195048498	pseudogene	Chr17:37528622-37528879 (+)
AKR/J	ENSMUSG00220052720	pseudogene	Chr17:36530932-36531189 (+)
BALB/cJ	ENSMUSG00180045307	pseudogene	Chr17:37327175-37327432 (+)
C3H/HeJ	ENSMUSG00175044464	pseudogene	Chr17:36609997-36610254 (+)
C57BL/6NJ	ENSMUSG00215053972	pseudogene	Chr17:36148573-36148830 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052251	pseudogene	Chr17:37344649-37344906 (+)
CBA/J	ENSMUSG00210052183	pseudogene	Chr17:36347886-36348143 (+)
DBA/2J	ENSMUSG00185055684	pseudogene	Chr17:39308045-39308302 (+)
FVB/NJ	ENSMUSG00205053771	pseudogene	Chr17:36815808-36816062 (+)
JF1/MsJ	ENSUMUG00000057678	pseudogene	Chr17:38947630-38947887 (+)
LP/J	ENSMUSG00230054875	pseudogene	Chr17:40126443-40126700 (+)
NOD/ShiLtJ	ENSMUSG00190053553	pseudogene	Chr17:36196418-36196675 (+)
NZO/HlLtJ	ENSMUSG00225043938	pseudogene	Chr17:42396082-42396339 (+)
PWK/PhJ	ENSLUMG00010045502	pseudogene	Chr17:36173621-36173878 (+)
SPRET/EiJ	ENSMSPG00010050410	pseudogene	Chr17:36507346-36507603 (+)
WSB/EiJ	ENSIUOG00005052338	pseudogene	Chr17:37176007-37176264 (+)

Homology

• Gene Tree
  Gm29748
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117230 (Evidence)
• NCBI Gene
  101055941

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117230	Ensembl Gene Model | MGI Sequence Detail	258	C57BL/6J
transcript	ENSMUST00000233401	Ensembl | MGI Sequence Detail	258	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;