Gm29745 Pseudogene Detail

Summary

• Symbol
  Gm29745
• Name
  predicted gene, 29745

• Feature Type
  pseudogene
• IDs
  MGI:5588904
  NCBI Gene: 101055931
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:11476420-11477106 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588904	pseudogene	Chr5:11476013-11477106 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195012804	pseudogene	Chr5:7787848-7788535 (+)
AKR/J	ENSMUSG00220002446	pseudogene	Chr5:7662349-7663036 (+)
BALB/cJ	ENSMUSG00180018484	pseudogene	Chr5:7386683-7387370 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001836	pseudogene	Chr5:7725459-7726146 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185029749	pseudogene	Chr5:8480674-8481360 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000004463	pseudogene	Chr5:8208919-8209605 (-)
LP/J	ENSMUSG00230003510	pseudogene	Chr5:12486598-12487284 (+)
NOD/ShiLtJ	ENSMUSG00190012886	pseudogene	Chr5:7449444-7450131 (+)
NZO/HlLtJ	ENSMUSG00225009064	pseudogene	Chr5:16163346-16164032 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010005054	pseudogene	Chr5:8005787-8006474 (+)
WSB/EiJ	ENSIUOG00005026484	pseudogene	Chr5:7687816-7688502 (-)

Homology

• Gene Tree
  Gm29745
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000104601 (Evidence)
• NCBI Gene
  101055931

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104601	Ensembl Gene Model | MGI Sequence Detail	687	C57BL/6J
transcript	ENSMUST00000198005	Ensembl | MGI Sequence Detail	687	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;