Gm29697 Pseudogene Detail

Summary

• Symbol
  Gm29697
• Name
  predicted gene, 29697

• Feature Type
  pseudogene
• IDs
  MGI:5588856
  NCBI Gene: 100862352
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:38574240-38577951 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  229 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588856	pseudogene	Chr15:38574214-38578197 (+)
129S1/SvImJ	ENSMUSG00200027478	pseudogene	Chr15:35573559-35577366 (+)
A/J	ENSMUSG00195036262	pseudogene	Chr15:35500869-35504581 (+)
AKR/J	ENSMUSG00220029467	pseudogene	Chr15:35414753-35418464 (+)
BALB/cJ	ENSMUSG00180033440	pseudogene	Chr15:35481442-35485158 (+)
C3H/HeJ	ENSMUSG00175029418	pseudogene	Chr15:35676835-35680533 (+)
C57BL/6NJ	ENSMUSG00215024539	pseudogene	Chr15:35487904-35491619 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010958	pseudogene	Chr15:35496850-35500292 (+)
CBA/J	ENSMUSG00210018112	pseudogene	Chr15:35594477-35598188 (+)
DBA/2J	ENSMUSG00185036543	pseudogene	Chr15:35575329-35579040 (+)
FVB/NJ	ENSMUSG00205033291	pseudogene	Chr15:35467258-35470968 (+)
JF1/MsJ	ENSUMUG00000037072	pseudogene	Chr15:35471718-35475535 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190031055	pseudogene	Chr15:35541740-35545439 (+)
NZO/HlLtJ	ENSMUSG00225031807	pseudogene	Chr15:39262941-39266639 (+)
PWK/PhJ	ENSLUMG00010032907	pseudogene	Chr15:35620851-35624648 (+)
SPRET/EiJ	ENSMSPG00010013882	pseudogene	Chr15:36282506-36285130 (+)
WSB/EiJ	ENSIUOG00005032820	pseudogene	Chr15:35590654-35594352 (+)

Homology

• Gene Tree
  Gm29697
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29697
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115587 (Evidence)
• NCBI Gene
  100862352

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115587	Ensembl Gene Model | MGI Sequence Detail	3712	C57BL/6J
transcript	ENSMUST00000226494	Ensembl | MGI Sequence Detail	1070	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17