Gm29686 Gene Detail

Summary

• Symbol
  Gm29686
• Name
  predicted gene, 29686

• Feature Type
  lncRNA gene
• IDs
  MGI:5588845
  NCBI Gene: 629091
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:51801396-51807650 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  258 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588845	lncRNA gene	Chr16:51800616-51825910 (-)
129S1/SvImJ	ENSMUSG00200021790	lncRNA gene	Chr16:48671872-48696995 (-)
A/J	ENSMUSG00195003616	lncRNA gene	Chr16:48284323-48309450 (-)
AKR/J	ENSMUSG00220023089	lncRNA gene	Chr16:48645782-48670905 (-)
BALB/cJ	ENSMUSG00180029883	lncRNA gene	Chr16:48488845-48513963 (-)
C3H/HeJ	ENSMUSG00175026924	lncRNA gene	Chr16:48791423-48816554 (-)
C57BL/6NJ	ENSMUSG00215008877	lncRNA gene	Chr16:48605918-48631039 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012954	lncRNA gene	Chr16:48870236-48895342 (-)
CBA/J	ENSMUSG00210016869	lncRNA gene	Chr16:48790150-48815287 (-)
DBA/2J	ENSMUSG00185011044	lncRNA gene	Chr16:48669010-48694126 (-)
FVB/NJ	ENSMUSG00205013574	lncRNA gene	Chr16:48555867-48581016 (-)
JF1/MsJ	ENSUMUG00000030102	lncRNA gene	Chr16:48885901-48917216 (-)
LP/J	ENSMUSG00230029356	lncRNA gene	Chr16:51216351-51241499 (-)
NOD/ShiLtJ	ENSMUSG00190019397	lncRNA gene	Chr16:48703916-48729034 (-)
NZO/HlLtJ	ENSMUSG00225026210	lncRNA gene	Chr16:54328993-54354084 (-)
PWK/PhJ	ENSLUMG00010027990	lncRNA gene	Chr16:48695902-48727136 (-)
SPRET/EiJ	ENSMSPG00010007859	lncRNA gene	Chr16:49052103-49077202 (-)
WSB/EiJ	ENSIUOG00005013468	lncRNA gene	Chr16:48839025-48864208 (-)

Homology

• Gene Tree
  Gm29686
  

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  42
• RefSeq
  1

• Ensembl
  ENSMUSG00000116725 (Evidence)
• NCBI Gene
  629091

Representative Sequences			Length	Strain/Species
genomic	629091	NCBI Gene Model | MGI Sequence Detail	6255	C57BL/6J
transcript	NR_153657	RefSeq | MGI Sequence Detail	975	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;