Gm29461 Gene Detail

Summary

• Symbol
  Gm29461
• Name
  predicted gene 29461

• Feature Type
  lncRNA gene
• IDs
  MGI:5580167
  NCBI Gene: 102634194
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:98101373-98118423 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580167	lncRNA gene	Chr1:98101373-98118423 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004928	lincRNA gene	Chr1:99951484-99968949 (+)
A/J	MGP_AJ_G0004910	lincRNA gene	Chr1:96453131-96469808 (+)
AKR/J	MGP_AKRJ_G0004888	lincRNA gene	Chr1:99247748-99265294 (+)
BALB/cJ	MGP_BALBcJ_G0004891	lincRNA gene	Chr1:96623145-96640198 (+)
C3H/HeJ	MGP_C3HHeJ_G0004840	lincRNA gene	Chr1:99524442-99545398 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005041	lincRNA gene	Chr1:103904503-103921743 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004464	lincRNA gene	Chr1:90719469-90737094 (+)
CAST/EiJ	MGP_CASTEiJ_G0004790	lincRNA gene	Chr1:98663116-98680887 (+)
CBA/J	MGP_CBAJ_G0004832	lincRNA gene	Chr1:107326975-107343764 (+)
DBA/2J	MGP_DBA2J_G0004851	lincRNA gene	Chr1:95661774-95679221 (+)
FVB/NJ	MGP_FVBNJ_G0004870	lincRNA gene	Chr1:94663410-94679981 (+)
LP/J	MGP_LPJ_G0004929	lincRNA gene	Chr1:101246651-101265167 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004855	lincRNA gene	Chr1:111029057-111045969 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005046	lincRNA gene	Chr1:99259773-99276663 (+)
PWK/PhJ	MGP_PWKPhJ_G0004743	lincRNA gene	Chr1:94865142-94886251 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004669	lincRNA gene	Chr1:98090339-98111691 (+)
WSB/EiJ	MGP_WSBEiJ_G0004836	lincRNA gene	Chr1:99095572-99115700 (+)

Homology

• Gene Tree
  Gm29461
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29461
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000100711 (Evidence)
• NCBI Gene
  102634194

Representative Sequences			Length	Strain/Species
genomic	102634194	NCBI Gene Model | MGI Sequence Detail	17051	C57BL/6J
transcript	NR_151613	RefSeq | MGI Sequence Detail	4191	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45