Gm29345 Gene Detail

Summary

• Symbol
  Gm29345
• Name
  predicted gene 29345

• Feature Type
  lncRNA gene
• IDs
  MGI:5580051
  NCBI Gene: 105246692
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:120744229-120802020 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1634 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580051	lncRNA gene	Chr1:120733811-120802023 (+)
129S1/SvImJ	ENSMUSG00200001972	lncRNA gene	Chr1:118226864-118253008 (+)
A/J	ENSMUSG00195004618	lncRNA gene	Chr1:117467753-117493909 (+)
AKR/J	ENSMUSG00220026121	lncRNA gene	Chr1:117283571-117309716 (+)
BALB/cJ	ENSMUSG00180012571	lncRNA gene	Chr1:117879479-117899949 (+)
C3H/HeJ	ENSMUSG00175019605	lncRNA gene	Chr1:117698728-117724871 (+)
C57BL/6NJ	ENSMUSG00215014597	lncRNA gene	Chr1:117651500-117672000 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004482	lincRNA gene	Chr1:112846483-112864976 (+)
CAST/EiJ	ENSTCUG00005006454	lncRNA gene	Chr1:116622732-116643485 (+)
CBA/J	ENSMUSG00210001427	lncRNA gene	Chr1:117528093-117554237 (+)
DBA/2J	ENSMUSG00185002115	lncRNA gene	Chr1:121971951-121998094 (+)
FVB/NJ	ENSMUSG00205012845	lncRNA gene	Chr1:117026899-117047370 (+)
JF1/MsJ	ENSUMUG00000027749	lncRNA gene	Chr1:121072041-121092525 (+)
LP/J	ENSMUSG00230009316	lncRNA gene	Chr1:121404546-121430689 (+)
NOD/ShiLtJ	ENSMUSG00190006690	lncRNA gene	Chr1:117513253-117539397 (+)
NZO/HlLtJ	ENSMUSG00225005282	lncRNA gene	Chr1:125181515-125202018 (+)
PWK/PhJ	ENSLUMG00010014656	lncRNA gene	Chr1:116680073-116701388 (+)
SPRET/EiJ	ENSMSPG00010017339	lncRNA gene	Chr1:119308583-119329355 (+)
WSB/EiJ	ENSIUOG00005003098	lncRNA gene	Chr1:117368537-117388998 (+)

Homology

• Gene Tree
  Gm29345
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm29345
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000101922 (Evidence)
• NCBI Gene
  105246692

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101922	Ensembl Gene Model | MGI Sequence Detail	57792	C57BL/6J
transcript	ENSMUST00000314001	Ensembl | MGI Sequence Detail	1346	Not Applicable

Other
Accession IDs

MGI:5593743

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45