Gm29328 Gene Detail

Summary

• Symbol
  Gm29328
• Name
  predicted gene 29328

• Feature Type
  lncRNA gene
• IDs
  MGI:5580034
  NCBI Gene: 108167439
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:71019980-71029633 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  367 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580034	lncRNA gene	Chr7:70914023-71033371 (+)
129S1/SvImJ	ENSMUSG00200012772	lncRNA gene	Chr7:57662832-57782525 (+)
A/J	ENSMUSG00195014829	lncRNA gene	Chr7:62065361-62181782 (+)
AKR/J	ENSMUSG00220020604	lncRNA gene	Chr7:55578690-55713975 (+)
BALB/cJ	ENSMUSG00180004669	lncRNA gene	Chr7:58775200-58891635 (+)
C3H/HeJ	ENSMUSG00175011048	lncRNA gene	Chr7:59567420-59683826 (+)
C57BL/6NJ	ENSMUSG00215024537	lncRNA gene	Chr7:58691802-58807512 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006549	lincRNA gene	Chr7:73989679-73999138 (+)
CAST/EiJ	ENSTCUG00005004313	lncRNA gene	Chr7:62251059-62367248 (+)
CBA/J	ENSMUSG00210020180	lncRNA gene	Chr7:59427429-59543834 (+)
DBA/2J	ENSMUSG00185001127	lncRNA gene	Chr7:63758059-63873807 (+)
FVB/NJ	ENSMUSG00205004970	lncRNA gene	Chr7:59415568-59524843 (+)
JF1/MsJ	ENSUMUG00000011615	lncRNA gene	Chr7:68523358-68633080 (+)
LP/J	ENSMUSG00230022199	lncRNA gene	Chr7:69847897-69963251 (+)
NOD/ShiLtJ	ENSMUSG00190007476	lncRNA gene	Chr7:59533244-59648965 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010019193	lncRNA gene	Chr7:58039986-58149774 (+)
SPRET/EiJ	ENSMSPG00010003500	lncRNA gene	Chr7:58394361-58503463 (+)
WSB/EiJ	ENSIUOG00005005592	lncRNA gene	Chr7:59923600-60045578 (+)

Homology

• Gene Tree
  Gm29328
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm29328
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  49
• RefSeq
  3

• Ensembl
  ENSMUSG00000099853 (Evidence)
• NCBI Gene
  108167439

Representative Sequences			Length	Strain/Species
genomic	108167439	NCBI Gene Model | MGI Sequence Detail	9654	C57BL/6J
transcript	XR_001778177	RefSeq | MGI Sequence Detail	608	C57BL/6J

References

• Summaries
  All 16

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67