Gm29295 Gene Detail

Summary

• Symbol
  Gm29295
• Name
  predicted gene 29295

• Feature Type
  lncRNA gene
• IDs
  MGI:5580001
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:71001199-71041020 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  1101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580001	lncRNA gene	Chr7:71001199-71041020 (+)
129S1/SvImJ	ENSMUSG00200012828	lncRNA gene	Chr7:57754036-57793816 (+)
A/J	ENSMUSG00195014885	lncRNA gene	Chr7:62153294-62193073 (+)
AKR/J	ENSMUSG00220020624	lncRNA gene	Chr7:55685494-55725266 (+)
BALB/cJ	ENSMUSG00180004693	lncRNA gene	Chr7:58863141-58902926 (+)
C3H/HeJ	ENSMUSG00175011065	lncRNA gene	Chr7:59655341-59695117 (+)
C57BL/6NJ	ENSMUSG00215024960	lncRNA gene	Chr7:58778994-58818813 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006548	lincRNA gene	Chr7:73971078-74010580 (+)
CAST/EiJ	ENSTCUG00005004329	lncRNA gene	Chr7:62338360-62378530 (+)
CBA/J	ENSMUSG00210020190	lncRNA gene	Chr7:59515343-59555127 (+)
DBA/2J	ENSMUSG00185001155	lncRNA gene	Chr7:63845299-63885126 (+)
FVB/NJ	ENSMUSG00205005021	lncRNA gene	Chr7:59496365-59536139 (+)
JF1/MsJ	ENSUMUG00000011555	lncRNA gene	Chr7:68604274-68644342 (+)
LP/J	ENSMUSG00230021340	lncRNA gene	Chr7:69934727-69974535 (+)
NOD/ShiLtJ	ENSMUSG00190007495	lncRNA gene	Chr7:59620476-59660259 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010019162	lncRNA gene	Chr7:58120913-58161061 (+)
SPRET/EiJ	ENSMSPG00010003491	lncRNA gene	Chr7:58474532-58514758 (+)
WSB/EiJ	ENSIUOG00005005623	lncRNA gene	Chr7:60017287-60056895 (+)

Homology

• Gene Tree
  Gm29295
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm29295
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099558 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099558	Ensembl Gene Model | MGI Sequence Detail	39822	C57BL/6J
transcript	ENSMUST00000190004	Ensembl | MGI Sequence Detail	1371	Not Applicable

References

• Summaries
  All 14

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67