Gm28523 Gene Detail

Summary

• Symbol
  Gm28523
• Name
  predicted gene 28523

• Feature Type
  lncRNA gene
• IDs
  MGI:5579229
  NCBI Gene: 102632597
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:141192646-141195735 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579229	lncRNA gene	Chr6:141190493-141196379 (-)
129S1/SvImJ	ENSMUSG00200033979	lncRNA gene	Chr6:138732685-138735773 (-)
A/J	ENSMUSG00195008339	lncRNA gene	Chr6:137638532-137641621 (-)
AKR/J	ENSMUSG00220034444	lncRNA gene	Chr6:135867563-135870654 (-)
BALB/cJ	ENSMUSG00180018504	lncRNA gene	Chr6:137731228-137734310 (-)
C3H/HeJ	ENSMUSG00175036119	lncRNA gene	Chr6:137666118-137669217 (-)
C57BL/6NJ	ENSMUSG00215029822	lncRNA gene	Chr6:137836623-137839718 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003956	antisense lncRNA gene	Chr6:139067965-139070970 (-)
CAST/EiJ	ENSTCUG00005036657	lncRNA gene	Chr6:138487653-138490736 (-)
CBA/J	ENSMUSG00210005132	lncRNA gene	Chr6:137727914-137731007 (-)
DBA/2J	ENSMUSG00185023272	lncRNA gene	Chr6:138378741-138381830 (-)
FVB/NJ	ENSMUSG00205031501	lncRNA gene	Chr6:136783478-136786538 (-)
JF1/MsJ	ENSUMUG00000010768	lncRNA gene	Chr6:137041300-137044408 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190006851	lncRNA gene	Chr6:138222940-138225990 (-)
NZO/HlLtJ	ENSMUSG00225013975	lncRNA gene	Chr6:142368836-142371928 (-)
PWK/PhJ	ENSLUMG00010036816	lncRNA gene	Chr6:136130840-136134054 (-)
SPRET/EiJ	ENSMSPG00010037657	lncRNA gene	Chr6:140035302-140038399 (-)
WSB/EiJ	ENSIUOG00005023099	lncRNA gene	Chr6:138472898-138475948 (-)

Homology

• Gene Tree
  Gm28523
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100707 (Evidence)
• NCBI Gene
  102632597

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100707	Ensembl Gene Model | MGI Sequence Detail	3090	C57BL/6J
transcript	ENSMUST00000190040	Ensembl | MGI Sequence Detail	1588	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm28523:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63929	Chr6:141195540-141195621 (-)	154 bp