Mir3084-2 Gene Detail

Summary

• Symbol
  Mir3084-2
• Name
  microRNA 3084-2
• Synonyms
  Gm38437, mmu-mir-3084-2

• Feature Type
  miRNA gene
• IDs
  MGI:5562754
  NCBI Gene: 102465114
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:60762767-60762835 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562754	miRNA gene	Chr19:60762767-60762835 (-)
129S1/SvImJ	ENSMUSG00200015401	miRNA gene	Chr19:57470010-57470078 (-)
A/J	ENSMUSG00195002604	miRNA gene	Chr19:57648669-57648737 (-)
AKR/J	ENSMUSG00220018181	miRNA gene	Chr19:57398084-57398152 (-)
BALB/cJ	ENSMUSG00180020456	miRNA gene	Chr19:57888614-57888682 (-)
C3H/HeJ	ENSMUSG00175023267	miRNA gene	Chr19:57429553-57429621 (-)
C57BL/6NJ	ENSMUSG00215026289	miRNA gene	Chr19:57498991-57499059 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015825	miRNA gene	Chr19:57059243-57059311 (-)
CBA/J	ENSMUSG00210021279	miRNA gene	Chr19:57509499-57509567 (-)
DBA/2J	ENSMUSG00185028549	miRNA gene	Chr19:58005451-58005519 (-)
FVB/NJ	ENSMUSG00205003628	miRNA gene	Chr19:56896547-56896615 (-)
JF1/MsJ	ENSUMUG00000039916	miRNA gene	Chr19:58204936-58205004 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190013804	miRNA gene	Chr19:57434669-57434737 (-)
NZO/HlLtJ	ENSMUSG00225021242	miRNA gene	Chr19:62375679-62375747 (-)
PWK/PhJ	ENSLUMG00010018913	miRNA gene	Chr19:57235698-57235766 (-)
SPRET/EiJ	ENSMSPG00010003342	miRNA gene	Chr19:57078399-57078467 (-)
WSB/EiJ	ENSIUOG00005025427	miRNA gene	Chr19:56847762-56847830 (-)

Homology

• Gene Tree
  Mir3084-2
  

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000118735 (Evidence)
• NCBI Gene
  102465114

Representative Sequences			Length	Strain/Species
genomic	102465114	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	NR_105743	RefSeq | MGI Sequence Detail	69	ZRU/MplStud

Other Database
Links

miRBase

MI0020958

Other
Accession IDs

MGI:5621322

References

• Summaries
  All 5
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4