Mir219c Gene Detail

Summary

• Symbol
  Mir219c
• Name
  microRNA 219c
• Synonyms
  mmu-mir-219c

• Feature Type
  miRNA gene
• IDs
  MGI:5562750
  NCBI Gene: 102466848
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:34243986-34244045 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562750	miRNA gene	Chr17:34243986-34244045 (+)
129S1/SvImJ	ENSMUSG00200054296	miRNA gene	Chr17:29947081-29947140 (+)
A/J	ENSMUSG00195046380	miRNA gene	Chr17:30811084-30811143 (+)
AKR/J	ENSMUSG00220053821	miRNA gene	Chr17:29838725-29838784 (+)
BALB/cJ	ENSMUSG00180045209	miRNA gene	Chr17:30200025-30200084 (+)
C3H/HeJ	ENSMUSG00175054187	miRNA gene	Chr17:29724917-29724976 (+)
C57BL/6NJ	ENSMUSG00215054483	miRNA gene	Chr17:29787247-29787306 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007554	miRNA gene	Chr17:30354623-30354682 (+)
CAST/EiJ	ENSTCUG00005052188	miRNA gene	Chr17:30770506-30770565 (+)
CBA/J	ENSMUSG00210051110	miRNA gene	Chr17:29547019-29547078 (+)
DBA/2J	ENSMUSG00185054590	miRNA gene	Chr17:32219332-32219391 (+)
FVB/NJ	ENSMUSG00205053667	miRNA gene	Chr17:30075761-30075818 (+)
JF1/MsJ	ENSUMUG00000057461	miRNA gene	Chr17:31480590-31480649 (+)
LP/J	ENSMUSG00230054814	miRNA gene	Chr17:33345434-33345493 (+)
NOD/ShiLtJ	ENSMUSG00190054385	miRNA gene	Chr17:29698921-29698980 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010053552	miRNA gene	Chr17:29325540-29325599 (+)
SPRET/EiJ	ENSMSPG00010050177	miRNA gene	Chr17:30468825-30468884 (+)
WSB/EiJ	ENSIUOG00005051792	miRNA gene	Chr17:30399302-30399361 (+)

Homology

• Gene Tree
  Mir219c
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Mir219c
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105964 (Evidence)
• NCBI Gene
  102466848

Representative Sequences			Length	Strain/Species
genomic	102466848	NCBI Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	NR_106154	RefSeq | MGI Sequence Detail	60	ZRU/MplStud

Other Database
Links

miRBase

MI0025034

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:36910 You Y, et al., Chromosomal deletion complexes in mice by radiation of embryonic stem cells. Nat Genet. 1997 Mar;15(3):285-8
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9