Gm28036 Gene Detail

Summary

• Symbol
  Gm28036
• Name
  predicted gene, 28036

• Feature Type
  protein coding gene
• IDs
  MGI:5547772
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:155913765-155969012 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1274 from dbSNP Build 142
• Strain Annotations
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5547772	protein coding gene	Chr2:155913765-155969012 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0024550	protein coding gene	Chr2:148037058-148090637 (-)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm28036
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• UniProt
  8

• Ensembl
  ENSMUSG00000098950 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098950	Ensembl Gene Model | MGI Sequence Detail	55248	C57BL/6J
transcript	ENSMUST00000132494	Ensembl | MGI Sequence Detail	5505	Not Applicable
polypeptide	ENSMUSP00000139175	Ensembl | MGI Sequence Detail	658	Not Applicable

Protein
Information

• UniProt
  8 Sequences
• InterPro Domains
  IPR050666 Epithelial Splicing Regulatory
  IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
  IPR015424 Pyridoxal phosphate-dependent transferase
  IPR015422 Pyridoxal phosphate-dependent transferase, small domain
  IPR034591 RBM12, RNA recognition motif 1
  IPR034594 RBM12, RNA recognition motif 2
  IPR034855 RBM12, RNA recognition motif 3
  IPR034856 RBM12, RNA recognition motif 4
  IPR035979 RNA-binding domain superfamily
  IPR000504 RNA recognition motif domain

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;