Mir7223 Gene Detail

Summary

• Symbol
  Mir7223
• Name
  microRNA 7223
• Synonyms
  mmu-mir-7223

• Feature Type
  miRNA gene
• IDs
  MGI:5531391
  NCBI Gene: 102465705
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:107887674-107887742 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531391	miRNA gene	Chr11:107887674-107887742 (+)
129S1/SvImJ	ENSMUSG00200034321	miRNA gene	Chr11:105204868-105204936 (+)
A/J	ENSMUSG00195022167	miRNA gene	Chr11:104907378-104907446 (+)
AKR/J	ENSMUSG00220036406	miRNA gene	Chr11:105120206-105120274 (+)
BALB/cJ	ENSMUSG00180021166	miRNA gene	Chr11:105229467-105229535 (+)
C3H/HeJ	ENSMUSG00175013791	miRNA gene	Chr11:105178523-105178591 (+)
C57BL/6NJ	ENSMUSG00215017045	miRNA gene	Chr11:104734235-104734303 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007180	miRNA gene	Chr11:103924175-103924248 (+)
CAST/EiJ	ENSTCUG00005041359	miRNA gene	Chr11:104631845-104631913 (+)
CBA/J	ENSMUSG00210013983	miRNA gene	Chr11:104884345-104884413 (+)
DBA/2J	ENSMUSG00185021101	miRNA gene	Chr11:105228257-105228325 (+)
FVB/NJ	ENSMUSG00205039554	miRNA gene	Chr11:105025306-105025374 (+)
JF1/MsJ	ENSUMUG00000031967	miRNA gene	Chr11:105493445-105493513 (+)
LP/J	ENSMUSG00230035307	miRNA gene	Chr11:106280198-106280266 (+)
NOD/ShiLtJ	ENSMUSG00190025554	miRNA gene	Chr11:105226737-105226805 (+)
NZO/HlLtJ	ENSMUSG00225052699	miRNA gene	Chr11:108315849-108315917 (+)
PWK/PhJ	ENSLUMG00010016926	miRNA gene	Chr11:105010906-105010974 (+)
SPRET/EiJ	ENSMSPG00010040118	miRNA gene	Chr11:105502775-105502843 (+)
WSB/EiJ	ENSIUOG00005018872	miRNA gene	Chr11:105000776-105000844 (+)

Homology

• Gene Tree
  Mir7223
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098989 (Evidence)
• NCBI Gene
  102465705

Representative Sequences			Length	Strain/Species
genomic	102465705	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	NR_106082	RefSeq | MGI Sequence Detail	69	ZRU/MplStud

Other Database
Links

miRBase

MI0023718

References

• Summaries
  All 6
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:355906 Meunier J, et al., Birth and expression evolution of mammalian microRNA genes. Genome Res. 2013 Jan;23(1):34-45

TSS for Mir7223:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr105599	Chr11:107886231-107886237 (+)	-1,440 bp