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Mir6397 Gene Detail
Summary
  • Symbol
    Mir6397
  • Name
    microRNA 6397
  • Synonyms
    mmu-mir-6397
Location &
Maps
more
  • Sequence Map
    Chr4:107944554-107944646 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531386
 miRNA gene Chr4:107944554-107944646 (+)
129S1/SvImJ ENSMUSG00200050383
 miRNA gene Chr4:102996448-102996540 (+)
A/J ENSMUSG00195047423
 miRNA gene Chr4:103539420-103539512 (+)
AKR/J ENSMUSG00220012485
 miRNA gene Chr4:102940358-102940450 (+)
BALB/cJ ENSMUSG00180048251
 miRNA gene Chr4:102376763-102376855 (+)
C3H/HeJ ENSMUSG00175043911
 miRNA gene Chr4:103381207-103381299 (+)
C57BL/6NJ ENSMUSG00215032887
 miRNA gene Chr4:103277211-103277303 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007884
 miRNA gene Chr4:100197894-100197986 (+)
CAST/EiJ ENSTCUG00005022863
 miRNA gene Chr4:102497353-102497445 (+)
CBA/J ENSMUSG00210053425
 miRNA gene Chr4:103014219-103014311 (+)
DBA/2J ENSMUSG00185050966
 miRNA gene Chr4:103724820-103724912 (+)
FVB/NJ ENSMUSG00205015929
 miRNA gene Chr4:101951113-101951205 (+)
JF1/MsJ ENSUMUG00000049482
 miRNA gene Chr4:103738889-103738981 (+)
LP/J ENSMUSG00230009433
 miRNA gene Chr4:107032874-107032966 (+)
NOD/ShiLtJ ENSMUSG00190047631
 miRNA gene Chr4:102384003-102384095 (+)
NZO/HlLtJ ENSMUSG00225032888
 miRNA gene Chr4:112143340-112143432 (+)
PWK/PhJ ENSLUMG00010048468
 miRNA gene Chr4:101461406-101461498 (+)
SPRET/EiJ ENSMSPG00010031246
 miRNA gene Chr4:103692667-103692759 (+)
WSB/EiJ ENSIUOG00005045559
 miRNA gene Chr4:102591002-102591094 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Mir6397
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102465213 NCBI Gene Model | MGI Sequence Detail 93 C57BL/6J ±  kb
transcript NR_105823 RefSeq | MGI Sequence Detail 93 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0021933
References
more
  • Summaries
    All 11
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory