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Mir6339 Gene Detail
Summary
  • Symbol
    Mir6339
  • Name
    microRNA 6339
  • Synonyms
    mmu-mir-6339
Location &
Maps
more
  • Sequence Map
    Chr2:129858212-129858328 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531230
 miRNA gene Chr2:129858212-129858328 (-)
129S1/SvImJ ENSMUSG00200049763
 miRNA gene Chr2:126900142-126900258 (-)
A/J ENSMUSG00195032353
 miRNA gene Chr2:126933400-126933516 (-)
AKR/J ENSMUSG00220045238
 miRNA gene Chr2:126693582-126693698 (-)
BALB/cJ ENSMUSG00180049736
 miRNA gene Chr2:126727500-126727616 (-)
C3H/HeJ ENSMUSG00175047556
 miRNA gene Chr2:127276548-127276664 (-)
C57BL/6NJ ENSMUSG00215037325
 miRNA gene Chr2:126781541-126781657 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007755
 miRNA gene Chr2:122802159-122802275 (-)
CAST/EiJ ENSTCUG00005040234
 miRNA gene Chr2:126058453-126058569 (-)
CBA/J ENSMUSG00210036488
 miRNA gene Chr2:127133470-127133586 (-)
DBA/2J ENSMUSG00185036015
 miRNA gene Chr2:126786388-126786504 (-)
FVB/NJ ENSMUSG00205042216
 miRNA gene Chr2:125948521-125948637 (-)
JF1/MsJ ENSUMUG00000028692
 miRNA gene Chr2:126603566-126603682 (-)
LP/J ENSMUSG00230039340
 miRNA gene Chr2:128535353-128535469 (-)
NOD/ShiLtJ ENSMUSG00190016456
 miRNA gene Chr2:126888014-126888130 (-)
NZO/HlLtJ ENSMUSG00225027740
 miRNA gene Chr2:136444153-136444269 (-)
PWK/PhJ ENSLUMG00010043559
 miRNA gene Chr2:126547412-126547528 (-)
SPRET/EiJ ENSMSPG00010034615
 miRNA gene Chr2:128944359-128944475 (-)
WSB/EiJ ENSIUOG00005044729
 miRNA gene Chr2:126711445-126711561 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Mir6339
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466628 NCBI Gene Model | MGI Sequence Detail 117 C57BL/6J ±  kb
transcript NR_105757 RefSeq | MGI Sequence Detail 117 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0021867
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory