Mir6911 Gene Detail

Summary

• Symbol
  Mir6911
• Name
  microRNA 6911
• Synonyms
  mmu-mir-6911

• Feature Type
  miRNA gene
• IDs
  MGI:5531204
  NCBI Gene: 102466207
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:80113998-80114066 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531204	miRNA gene	Chr10:80113998-80114066 (+)
129S1/SvImJ	ENSMUSG00200051043	miRNA gene	Chr10:76737669-76737737 (+)
A/J	ENSMUSG00195051024	miRNA gene	Chr10:77133219-77133287 (+)
AKR/J	ENSMUSG00220049999	miRNA gene	Chr10:76730794-76730862 (+)
BALB/cJ	ENSMUSG00180053129	miRNA gene	Chr10:77143725-77143793 (+)
C3H/HeJ	ENSMUSG00175052765	miRNA gene	Chr10:77014400-77014468 (+)
C57BL/6NJ	ENSMUSG00215053123	miRNA gene	Chr10:76756131-76756199 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007035	miRNA gene	Chr10:74265136-74265204 (+)
CAST/EiJ	ENSTCUG00005051790	miRNA gene	Chr10:76640818-76640886 (+)
CBA/J	ENSMUSG00210049857	miRNA gene	Chr10:76870479-76870547 (+)
DBA/2J	ENSMUSG00185054415	miRNA gene	Chr10:77212863-77212931 (+)
FVB/NJ	ENSMUSG00205051081	miRNA gene	Chr10:76925649-76925717 (+)
JF1/MsJ	ENSUMUG00000056334	miRNA gene	Chr10:78441323-78441391 (+)
LP/J	ENSMUSG00230051444	miRNA gene	Chr10:78982594-78982662 (+)
NOD/ShiLtJ	ENSMUSG00190052831	miRNA gene	Chr10:77126593-77126661 (+)
NZO/HlLtJ	ENSMUSG00225052773	miRNA gene	Chr10:83268952-83269020 (+)
PWK/PhJ	ENSLUMG00010051525	miRNA gene	Chr10:76802828-76802896 (+)
SPRET/EiJ	ENSMSPG00010048600	miRNA gene	Chr10:78424709-78424777 (+)
WSB/EiJ	ENSIUOG00005051266	miRNA gene	Chr10:76830606-76830674 (+)

Homology

• Gene Tree
  Mir6911
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6911
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098672 (Evidence)
• NCBI Gene
  102466207

Representative Sequences			Length	Strain/Species
genomic	102466207	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	NR_105876	RefSeq | MGI Sequence Detail	69	ZRU/MplStud

Other Database
Links

miRBase

MI0022758

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

TSS for Mir6911:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94534	Chr10:80112565-80112569 (+)	-1,431 bp