Mir6967-1 Gene Detail

Summary

• Symbol
  Mir6967-1
• Name
  microRNA 6967-1
• Synonyms
  Gm27775

• Feature Type
  miRNA gene
• IDs
  MGI:5531157
  NCBI Gene: 102466211
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:27139936-27139993 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531157	miRNA gene	Chr17:27139936-27139993 (+)
129S1/SvImJ	ENSMUSG00200053943	miRNA gene	Chr17:22585829-22585886 (+)
A/J	ENSMUSG00195054593	miRNA gene	Chr17:23606540-23606597 (+)
AKR/J	ENSMUSG00220053962	miRNA gene	Chr17:22653804-22653861 (+)
BALB/cJ	ENSMUSG00180051113	miRNA gene	Chr17:22883981-22884038 (+)
C3H/HeJ	ENSMUSG00175053795	miRNA gene	Chr17:22642447-22642504 (+)
C57BL/6NJ	ENSMUSG00215054581	miRNA gene	Chr17:22650381-22650438 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051936	miRNA gene	Chr17:23251122-23251179 (+)
CBA/J	ENSMUSG00210051420	miRNA gene	Chr17:22481257-22481314 (+)
DBA/2J	ENSMUSG00185055275	miRNA gene	Chr17:24694720-24694777 (+)
FVB/NJ	ENSMUSG00205053541	miRNA gene	Chr17:22957164-22957221 (+)
JF1/MsJ	ENSUMUG00000058050	miRNA gene	Chr17:24154659-24154716 (+)
LP/J	ENSMUSG00230055085	miRNA gene	Chr17:26090323-26090380 (+)
NOD/ShiLtJ	ENSMUSG00190054479	miRNA gene	Chr17:22587377-22587434 (+)
NZO/HlLtJ	ENSMUSG00225054399	miRNA gene	Chr17:28020261-28020318 (+)
PWK/PhJ	ENSLUMG00010053462	miRNA gene	Chr17:22067522-22067579 (+)
SPRET/EiJ	ENSMSPG00010049962	miRNA gene	Chr17:23397075-23397132 (+)
WSB/EiJ	ENSIUOG00005051980	miRNA gene	Chr17:23345732-23345789 (+)

Homology

• Gene Tree
  Mir6967-1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Mir6967-1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119141 (Evidence)
• NCBI Gene
  102466211

Representative Sequences			Length	Strain/Species
genomic	102466211	NCBI Gene Model | MGI Sequence Detail	58	C57BL/6J
transcript	NR_105933	RefSeq | MGI Sequence Detail	58	ZRU/MplStud

Other Database
Links

miRBase

MI0022815

Other
Accession IDs

MGI:6690722

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:86784 Bergstrom DE, et al., Overlapping deletions spanning the proximal two-thirds of the mouse t complex. Mamm Genome. 2003 Dec;14(12):817-29
• Latest
  J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044