Mir8100 Gene Detail

Summary

• Symbol
  Mir8100
• Name
  microRNA 8100
• Synonyms
  mmu-mir-8100

• Feature Type
  miRNA gene
• IDs
  MGI:5531020
  NCBI Gene: 102465996
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:45993097-45993217 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531020	miRNA gene	Chr11:45993097-45993217 (+)
129S1/SvImJ	ENSMUSG00200040510	miRNA gene	Chr11:43060052-43060172 (+)
A/J	ENSMUSG00195036144	miRNA gene	Chr11:43004081-43004201 (+)
AKR/J	ENSMUSG00220039072	miRNA gene	Chr11:43188770-43188890 (+)
BALB/cJ	ENSMUSG00180036890	miRNA gene	Chr11:42993881-42994001 (+)
C3H/HeJ	ENSMUSG00175038344	miRNA gene	Chr11:42997504-42997624 (+)
C57BL/6NJ	ENSMUSG00215036530	miRNA gene	Chr11:42942266-42942386 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007094	miRNA gene	Chr11:41256635-41256755 (+)
CAST/EiJ	ENSTCUG00005044331	miRNA gene	Chr11:42736322-42736442 (+)
CBA/J	ENSMUSG00210030310	miRNA gene	Chr11:42887429-42887549 (+)
DBA/2J	ENSMUSG00185028937	miRNA gene	Chr11:43063554-43063674 (+)
FVB/NJ	ENSMUSG00205036468	miRNA gene	Chr11:42997280-42997400 (+)
JF1/MsJ	ENSUMUG00000044190	miRNA gene	Chr11:43327434-43327554 (+)
LP/J	ENSMUSG00230034450	miRNA gene	Chr11:44213798-44213918 (+)
NOD/ShiLtJ	ENSMUSG00190043522	miRNA gene	Chr11:43104221-43104341 (+)
NZO/HlLtJ	ENSMUSG00225036304	miRNA gene	Chr11:46162744-46162864 (+)
PWK/PhJ	ENSLUMG00010034715	miRNA gene	Chr11:42884766-42884886 (+)
SPRET/EiJ	ENSMSPG00010019914	miRNA gene	Chr11:43499860-43499981 (+)
WSB/EiJ	ENSIUOG00005042835	miRNA gene	Chr11:42886498-42886618 (+)

Homology

• Gene Tree
  Mir8100
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir8100
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098942 (Evidence)
• NCBI Gene
  102465996

Representative Sequences			Length	Strain/Species
genomic	102465996	NCBI Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	NR_106177	RefSeq | MGI Sequence Detail	121	ZRU/MplStud

Other Database
Links

miRBase

MI0026029

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4