Gm27572 Gene Detail

Summary

• Symbol
  Gm27572
• Name
  predicted gene, 27572

• Feature Type
  lncRNA gene
• IDs
  MGI:5530954
  NCBI Gene: 102635184
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:108634918-108635172 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530954	lncRNA gene	Chr13:108633403-108635172 (-)
129S1/SvImJ	ENSMUSG00200033286	unclassified non-coding RNA gene	Chr13:103085464-103085718 (-)
A/J	ENSMUSG00195014012	unclassified non-coding RNA gene	Chr13:103636185-103636440 (-)
AKR/J	ENSMUSG00220033433	unclassified non-coding RNA gene	Chr13:102065540-102065794 (-)
BALB/cJ	ENSMUSG00180031978	unclassified non-coding RNA gene	Chr13:104214636-104214891 (-)
C3H/HeJ	ENSMUSG00175028407	unclassified non-coding RNA gene	Chr13:104310373-104310628 (-)
C57BL/6NJ	ENSMUSG00215025799	unclassified non-coding RNA gene	Chr13:104284190-104284444 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027081	unclassified non-coding RNA gene	Chr13:103393149-103393405 (-)
CBA/J	ENSMUSG00210011116	unclassified non-coding RNA gene	Chr13:103638247-103638502 (-)
DBA/2J	ENSMUSG00185027828	unclassified non-coding RNA gene	Chr13:107393671-107393926 (-)
FVB/NJ	ENSMUSG00205007798	unclassified non-coding RNA gene	Chr13:103059000-103059255 (-)
JF1/MsJ	ENSUMUG00000015007	unclassified non-coding RNA gene	Chr13:106903458-106903713 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190020357	unclassified non-coding RNA gene	Chr13:103948667-103948921 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010010846	unclassified non-coding RNA gene	Chr13:102938525-102938781 (-)
SPRET/EiJ	ENSMSPG00010018485	unclassified non-coding RNA gene	Chr13:104576821-104577075 (-)
WSB/EiJ	ENSIUOG00005010061	unclassified non-coding RNA gene	Chr13:103102357-103102611 (-)

Homology

• Gene Tree
  Gm27572
  

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00002075746 (Evidence)
• NCBI Gene
  102635184

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075746	Ensembl Gene Model | MGI Sequence Detail	255	C57BL/6J
transcript	ENSMUST00020183113	Ensembl | MGI Sequence Detail	255	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;