Gm27521 Gene Detail

Summary

• Symbol
  Gm27521
• Name
  predicted gene, 27521

• Feature Type
  snRNA gene
• IDs
  MGI:5530903
  NCBI Gene: 115490036
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:96805257-96805320 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530903	snRNA gene	Chr4:96805257-96805320 (+)
129S1/SvImJ	ENSMUSG00200031405	snRNA gene	Chr4:91781093-91781156 (+)
A/J	ENSMUSG00195009054	snRNA gene	Chr4:92309092-92309155 (+)
AKR/J	ENSMUSG00220006704	snRNA gene	Chr4:91766417-91766480 (+)
BALB/cJ	ENSMUSG00180034696	snRNA gene	Chr4:91254573-91254636 (+)
C3H/HeJ	ENSMUSG00175015453	snRNA gene	Chr4:92246559-92246622 (+)
C57BL/6NJ	ENSMUSG00215024583	snRNA gene	Chr4:92176093-92176156 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035296	snRNA gene	Chr4:89095199-89095259 (+)
CAST/EiJ	ENSTCUG00005019102	snRNA gene	Chr4:91525770-91525833 (+)
CBA/J	ENSMUSG00210029628	snRNA gene	Chr4:91770353-91770416 (+)
DBA/2J	ENSMUSG00185022474	snRNA gene	Chr4:92583456-92583519 (+)
FVB/NJ	ENSMUSG00205014967	snRNA gene	Chr4:90788796-90788859 (+)
JF1/MsJ	ENSUMUG00000041990	snRNA gene	Chr4:92673475-92673538 (+)
LP/J	ENSMUSG00230023139	snRNA gene	Chr4:95890035-95890098 (+)
NOD/ShiLtJ	ENSMUSG00190032249	snRNA gene	Chr4:91246431-91246494 (+)
NZO/HlLtJ	ENSMUSG00225003831	snRNA gene	Chr4:101035441-101035504 (+)
PWK/PhJ	ENSLUMG00010003497	snRNA gene	Chr4:90394771-90394834 (+)
SPRET/EiJ	ENSMSPG00010008306	snRNA gene	Chr4:92598630-92598693 (+)
WSB/EiJ	ENSIUOG00005003298	snRNA gene	Chr4:91575901-91575964 (+)

Homology

• Gene Tree
  Gm27521
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm27521
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098261 (Evidence)
• NCBI Gene
  115490036

Representative Sequences			Length	Strain/Species
genomic	115490036	NCBI Gene Model | MGI Sequence Detail	64	C57BL/6J
transcript	XR_004942317	RefSeq | MGI Sequence Detail	64	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12