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Mir6538 Gene Detail
Summary
  • Symbol
    Mir6538
  • Name
    microRNA 6538
  • Synonyms
    mmu-mir-6538
Location &
Maps
more
  • Sequence Map
    Chr12:26464900-26465009 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5530821
 miRNA gene Chr12:26464900-26465009 (-)
129S1/SvImJ ENSMUSG00200023134
 miRNA gene Chr12:18201795-18201904 (-)
A/J ENSMUSG00195022951
 miRNA gene Chr12:20935929-20936038 (-)
AKR/J ENSMUSG00220027509
 miRNA gene Chr12:18881996-18882105 (-)
BALB/cJ ENSMUSG00180010265
 miRNA gene Chr12:19878641-19878750 (-)
C3H/HeJ ENSMUSG00175022303
 miRNA gene Chr12:22926834-22926943 (-)
C57BL/6NJ ENSMUSG00215006143
 miRNA gene Chr12:19361521-19361630 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007200
 miRNA gene Chr12:22951790-22951899 (-)
CAST/EiJ ENSTCUG00005005927
 miRNA gene Chr12:19749242-19749351 (-)
CBA/J ENSMUSG00210007943
 miRNA gene Chr12:19413029-19413138 (-)
DBA/2J ENSMUSG00185015309
 miRNA gene Chr12:21436517-21436626 (-)
FVB/NJ ENSMUSG00205002129
 miRNA gene Chr12:19507313-19507422 (-)
JF1/MsJ ENSUMUG00000007246
 miRNA gene Chr12:25679277-25679386 (-)
LP/J ENSMUSG00230007686
 miRNA gene Chr12:28405866-28405975 (-)
NOD/ShiLtJ ENSMUSG00190014666
 miRNA gene Chr12:18385416-18385525 (-)
NZO/HlLtJ ENSMUSG00225035068
 miRNA gene Chr12:30598695-30598804 (-)
PWK/PhJ ENSLUMG00010004680
 miRNA gene Chr12:19935819-19935928 (-)
SPRET/EiJ ENSMSPG00010003479
 miRNA gene Chr12:20211908-20212017 (-)
WSB/EiJ ENSIUOG00005001799
 miRNA gene Chr12:19080335-19080444 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466676 NCBI Gene Model | MGI Sequence Detail 110 C57BL/6J ±  kb
transcript NR_105856 RefSeq | MGI Sequence Detail 110 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0022354
References
more
  • Summaries
    All 6
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:357102 Kuchen S, et al., Regulation of microRNA expression and abundance during lymphopoiesis. Immunity. 2010 Jun 25;32(6):828-39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory