Gm27414 Gene Detail

Summary

• Symbol
  Gm27414
• Name
  predicted gene, 27414

• Feature Type
  snoRNA gene
• IDs
  MGI:5530796
  NCBI Gene: 115486126
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:114308512-114308892 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  31 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530796	snoRNA gene	ChrX:114308512-114308892 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036854	snoRNA gene	ChrX:112202956-112203336 (+)
A/J	MGP_AJ_G0036842	snoRNA gene	ChrX:111943549-111943929 (+)
AKR/J	MGP_AKRJ_G0036791	snoRNA gene	ChrX:115439743-115440123 (+)
BALB/cJ	MGP_BALBcJ_G0036833	snoRNA gene	ChrX:110465092-110465472 (+)
C3H/HeJ	MGP_C3HHeJ_G0036518	snoRNA gene	ChrX:112548131-112548511 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037346	snoRNA gene	ChrX:115478864-115479244 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034409	snoRNA gene	ChrX:108383332-108383712 (+)
CAST/EiJ	MGP_CASTEiJ_G0035708	snoRNA gene	ChrX:96360532-96360912 (+)
CBA/J	MGP_CBAJ_G0036494	snoRNA gene	ChrX:119098439-119098819 (+)
DBA/2J	MGP_DBA2J_G0036670	snoRNA gene	ChrX:111176317-111176697 (+)
FVB/NJ	MGP_FVBNJ_G0036622	snoRNA gene	ChrX:110577834-110578214 (+)
LP/J	MGP_LPJ_G0036717	snoRNA gene	ChrX:113049810-113050190 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036628	snoRNA gene	ChrX:124767839-124768219 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037462	snoRNA gene	ChrX:111711664-111712044 (+)
PWK/PhJ	MGP_PWKPhJ_G0035401	snoRNA gene	ChrX:93768292-93768672 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035216	snoRNA gene	ChrX:97137075-97137455 (+)
WSB/EiJ	MGP_WSBEiJ_G0035910	snoRNA gene	ChrX:110447981-110448361 (+)

Homology

• Gene Tree
  Gm27414
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098405 (Evidence)
• NCBI Gene
  115486126

Representative Sequences			Length	Strain/Species
genomic	115486126	NCBI Gene Model | MGI Sequence Detail	381	C57BL/6J
transcript	XR_004940569	RefSeq | MGI Sequence Detail	381	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;