Mir6348 Gene Detail

Summary

• Symbol
  Mir6348
• Name
  microRNA 6348
• Synonyms
  mmu-mir-6348

• Feature Type
  miRNA gene
• IDs
  MGI:5530794
  NCBI Gene: 102465178
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:168318212-168318331 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530794	miRNA gene	Chr1:168318212-168318331 (+)
129S1/SvImJ	ENSMUSG00200047115	miRNA gene	Chr1:165823854-165823973 (+)
A/J	ENSMUSG00195048937	miRNA gene	Chr1:165128800-165128919 (+)
AKR/J	ENSMUSG00220031779	miRNA gene	Chr1:164855902-164856021 (+)
BALB/cJ	ENSMUSG00180045649	miRNA gene	Chr1:165376483-165376602 (+)
C3H/HeJ	ENSMUSG00175049115	miRNA gene	Chr1:165480241-165480360 (+)
C57BL/6NJ	ENSMUSG00215045593	miRNA gene	Chr1:165258020-165258139 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006988	miRNA gene	Chr1:158826251-158826370 (+)
CAST/EiJ	ENSTCUG00005046487	miRNA gene	Chr1:163824045-163824164 (+)
CBA/J	ENSMUSG00210042957	miRNA gene	Chr1:165342449-165342568 (+)
DBA/2J	ENSMUSG00185012252	miRNA gene	Chr1:169559069-169559188 (+)
FVB/NJ	ENSMUSG00205042405	miRNA gene	Chr1:164341791-164341910 (+)
JF1/MsJ	ENSUMUG00000013716	miRNA gene	Chr1:168718994-168719113 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190040323	miRNA gene	Chr1:165134620-165134739 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010036277	miRNA gene	Chr1:164098619-164098738 (+)
SPRET/EiJ	ENSMSPG00010048884	miRNA gene	Chr1:167597231-167597349 (+)
WSB/EiJ	ENSIUOG00005039345	miRNA gene	Chr1:164573852-164573971 (+)

Homology

• Gene Tree
  Mir6348
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Mir6348
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098407 (Evidence)
• NCBI Gene
  102465178

Representative Sequences			Length	Strain/Species
genomic	102465178	NCBI Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	NR_105766	RefSeq | MGI Sequence Detail	120	ZRU/MplStud

Other Database
Links

miRBase

MI0021876

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4