Gm27343 Gene Detail

Summary

• Symbol
  Gm27343
• Name
  predicted gene, 27343

• Feature Type
  snRNA gene
• IDs
  MGI:5530725
  NCBI Gene: 115489597
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:152259182-152259244 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530725	snRNA gene	Chr2:152259182-152259244 (+)
129S1/SvImJ	ENSMUSG00200031154	snRNA gene	Chr2:149159272-149159334 (+)
A/J	ENSMUSG00195022679	snRNA gene	Chr2:149442904-149442966 (+)
AKR/J	ENSMUSG00220046330	snRNA gene	Chr2:148767837-148767899 (+)
BALB/cJ	ENSMUSG00180044501	snRNA gene	Chr2:148929333-148929395 (+)
C3H/HeJ	ENSMUSG00175047547	snRNA gene	Chr2:149675558-149675620 (+)
C57BL/6NJ	ENSMUSG00215035429	snRNA gene	Chr2:149102522-149102584 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035177	snRNA gene	Chr2:144292403-144292465 (+)
CAST/EiJ	ENSTCUG00005044548	snRNA gene	Chr2:148026130-148026192 (+)
CBA/J	ENSMUSG00210046565	snRNA gene	Chr2:149612048-149612110 (+)
DBA/2J	ENSMUSG00185048514	snRNA gene	Chr2:149262545-149262607 (+)
FVB/NJ	ENSMUSG00205039001	snRNA gene	Chr2:148359288-148359350 (+)
JF1/MsJ	ENSUMUG00000049201	snRNA gene	Chr2:148931756-148931818 (+)
LP/J	ENSMUSG00230037048	snRNA gene	Chr2:150911682-150911744 (+)
NOD/ShiLtJ	ENSMUSG00190045089	snRNA gene	Chr2:149031104-149031166 (+)
NZO/HlLtJ	ENSMUSG00225005809	snRNA gene	Chr2:158950687-158950749 (+)
PWK/PhJ	ENSLUMG00010047436	snRNA gene	Chr2:148900923-148900985 (+)
SPRET/EiJ	ENSMSPG00010029684	snRNA gene	Chr2:151626002-151626064 (+)
WSB/EiJ	ENSIUOG00005048245	snRNA gene	Chr2:148766830-148766892 (+)

Homology

• Gene Tree
  Gm27343
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000088139 (Evidence)
• NCBI Gene
  115489597

Representative Sequences			Length	Strain/Species
genomic	115489597	NCBI Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	XR_004941167	RefSeq | MGI Sequence Detail	63	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;