Mir6359 Gene Detail

Summary

• Symbol
  Mir6359
• Name
  microRNA 6359
• Synonyms
  mmu-mir-6359

• Feature Type
  miRNA gene
• IDs
  MGI:5530710
  NCBI Gene: 102466633
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:88990154-88990234 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530710	miRNA gene	Chr18:88990154-88990234 (+)
129S1/SvImJ	ENSMUSG00200015531	miRNA gene	Chr18:86309226-86309306 (+)
A/J	ENSMUSG00195001342	miRNA gene	Chr18:86262608-86262688 (+)
AKR/J	ENSMUSG00220016866	miRNA gene	Chr18:86188998-86189078 (+)
BALB/cJ	ENSMUSG00180002651	miRNA gene	Chr18:86865848-86865928 (+)
C3H/HeJ	ENSMUSG00175018913	miRNA gene	Chr18:86372689-86372769 (+)
C57BL/6NJ	ENSMUSG00215004335	miRNA gene	Chr18:85841315-85841395 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007612	miRNA gene	Chr18:85029886-85029966 (+)
CAST/EiJ	ENSTCUG00005005590	miRNA gene	Chr18:85283256-85283336 (+)
CBA/J	ENSMUSG00210018211	miRNA gene	Chr18:86317518-86317598 (+)
DBA/2J	ENSMUSG00185004309	miRNA gene	Chr18:86216059-86216139 (+)
FVB/NJ	ENSMUSG00205014684	miRNA gene	Chr18:85663889-85663969 (+)
JF1/MsJ	ENSUMUG00000018978	miRNA gene	Chr18:86095502-86095582 (+)
LP/J	ENSMUSG00230018059	miRNA gene	Chr18:88372335-88372415 (+)
NOD/ShiLtJ	ENSMUSG00190003532	miRNA gene	Chr18:86035473-86035553 (+)
NZO/HlLtJ	ENSMUSG00225023588	miRNA gene	Chr18:88219259-88219339 (+)
PWK/PhJ	ENSLUMG00010004207	miRNA gene	Chr18:86512517-86512597 (+)
SPRET/EiJ	ENSMSPG00010001390	miRNA gene	Chr18:87026598-87026678 (+)
WSB/EiJ	ENSIUOG00005016520	miRNA gene	Chr18:85722035-85722115 (+)

Homology

• Gene Tree
  Mir6359
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Mir6359
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098676 (Evidence)
• NCBI Gene
  102466633

Representative Sequences			Length	Strain/Species
genomic	102466633	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	NR_105777	RefSeq | MGI Sequence Detail	81	ZRU/MplStud

Other Database
Links

miRBase

MI0021887

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:45709 Melloy PG, et al., No turning, a mouse mutation causing left-right and axial patterning defects. Dev Biol. 1998 Jan 1;193(1):77-89
• Latest
  J:132045 Chatterjee B, et al., Nt mutation causing laterality defects associated with deletion of rotatin. Mamm Genome. 2007 May;18(5):310-5

TSS for Mir6359:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr152266	Chr18:88990126-88990164 (+)	-9 bp