Mir6923 Gene Detail

Summary

• Symbol
  Mir6923
• Name
  microRNA 6923
• Synonyms
  mmu-mir-6923

• Feature Type
  miRNA gene
• IDs
  MGI:5530694
  NCBI Gene: 102466766
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:66990630-66990701 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530694	miRNA gene	Chr11:66990630-66990701 (+)
129S1/SvImJ	ENSMUSG00200050120	miRNA gene	Chr11:63938255-63938326 (+)
A/J	ENSMUSG00195053038	miRNA gene	Chr11:63958631-63958702 (+)
AKR/J	ENSMUSG00220054228	miRNA gene	Chr11:64074964-64075035 (+)
BALB/cJ	ENSMUSG00180053755	miRNA gene	Chr11:64024760-64024831 (+)
C3H/HeJ	ENSMUSG00175054410	miRNA gene	Chr11:63974957-63975028 (+)
C57BL/6NJ	ENSMUSG00215055171	miRNA gene	Chr11:63758948-63759019 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007116	miRNA gene	Chr11:61817992-61818064 (+)
CAST/EiJ	ENSTCUG00005053645	miRNA gene	Chr11:63509531-63509602 (+)
CBA/J	ENSMUSG00210054442	miRNA gene	Chr11:63829295-63829366 (+)
DBA/2J	ENSMUSG00185056853	miRNA gene	Chr11:64023444-64023515 (+)
FVB/NJ	ENSMUSG00205053929	miRNA gene	Chr11:63922673-63922744 (+)
JF1/MsJ	ENSUMUG00000057196	miRNA gene	Chr11:64418776-64418847 (+)
LP/J	ENSMUSG00230053958	miRNA gene	Chr11:65148686-65148757 (+)
NOD/ShiLtJ	ENSMUSG00190054134	miRNA gene	Chr11:64056218-64056289 (+)
NZO/HlLtJ	ENSMUSG00225047837	miRNA gene	Chr11:67329250-67329321 (+)
PWK/PhJ	ENSLUMG00010053667	miRNA gene	Chr11:63945049-63945120 (+)
SPRET/EiJ	ENSMSPG00010049028	miRNA gene	Chr11:64669684-64669755 (+)
WSB/EiJ	ENSIUOG00005052933	miRNA gene	Chr11:63960427-63960498 (+)

Homology

• Gene Tree
  Mir6923
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6923
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098855 (Evidence)
• NCBI Gene
  102466766

Representative Sequences			Length	Strain/Species
genomic	102466766	NCBI Gene Model | MGI Sequence Detail	72	C57BL/6J
transcript	NR_105888	RefSeq | MGI Sequence Detail	72	ZRU/MplStud

Other Database
Links

miRBase

MI0022770

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

TSS for Mir6923:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr102156	Chr11:66988720-66988774 (+)	-1,883 bp
Tssr102157	Chr11:66989394-66989407 (+)	-1,229 bp