Gm44501 Gene Detail

Summary

• Symbol
  Gm44501
• Name
  predicted readthrough transcript, 44501
• Synonyms
  Esp6Esp5

• Feature Type
  protein coding gene
• IDs
  MGI:5529083
  NCBI Gene: 102577428
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr17:40872398-40890440 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic

Strain
Comparison

• SNPs within 2kb
  567 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5529083	protein coding gene	Chr17:40872398-40890440 (+)
129S1/SvImJ	ENSMUSG00200045430	protein coding gene	Chr17:36040185-36042641 (+)
A/J	ENSMUSG00195041364	protein coding gene	Chr17:37552628-37555084 (+)
AKR/J	ENSMUSG00220036891	protein coding gene	Chr17:36554841-36557297 (+)
BALB/cJ	ENSMUSG00180042262	protein coding gene	Chr17:37351180-37353636 (+)
C3H/HeJ	ENSMUSG00175036784	protein coding gene	Chr17:36633904-36636360 (+)
C57BL/6NJ	ENSMUSG00215053060	protein coding gene	Chr17:36172567-36175023 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0021614	protein coding gene	Chr17:37519007-37536246 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210036372	protein coding gene	Chr17:36371793-36374249 (+)
DBA/2J	ENSMUSG00185052653	protein coding gene	Chr17:39332055-39334511 (+)
FVB/NJ	ENSMUSG00205033512	protein coding gene	Chr17:36839805-36842273 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230053649	protein coding gene	Chr17:40150345-40152801 (+)
NOD/ShiLtJ	ENSMUSG00190029388	protein coding gene	Chr17:36220420-36222876 (+)
NZO/HlLtJ	ENSMUSG00225042473	protein coding gene	Chr17:42420082-42422538 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm44501
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2
• UniProt
  2
• CCDS
  CCDS70814.1

• Ensembl
  ENSMUSG00000090897 (Evidence)
• NCBI Gene
  102577428

Representative Sequences			Length	Strain/Species
genomic	102577428	NCBI Gene Model | MGI Sequence Detail	18043	C57BL/6J
transcript	NM_001287195	RefSeq | MGI Sequence Detail	1229	BALB/c
polypeptide	NP_001274124	RefSeq | MGI Sequence Detail	150	BALB/c

Protein
Information

• UniProt
  2 Sequences

References

• Summaries
  All 8
• Earliest
  J:174752 Kimoto H, et al., Sex- and strain-specific expression and vomeronasal activity of mouse ESP family peptides. Curr Biol. 2007 Nov 6;17(21):1879-84

TSS for Gm44501:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144639	Chr17:40872371-40872378 (+)	-23 bp
Tssr144640	Chr17:40872389-40872403 (+)	-2 bp