Gm27201 Gene Detail

Summary

• Symbol
  Gm27201
• Name
  predicted gene 27201

• Feature Type
  lncRNA gene
• IDs
  MGI:5521044
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:32419694-32428308 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  313 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5521044	lncRNA gene	Chr9:32419694-32428308 (+)
129S1/SvImJ	ENSMUSG00200008424	lncRNA gene	Chr9:29441521-29450066 (+)
A/J	ENSMUSG00195006502	lncRNA gene	Chr9:29232696-29241245 (+)
AKR/J	ENSMUSG00220010526	lncRNA gene	Chr9:29262494-29271042 (+)
BALB/cJ	ENSMUSG00180006844	lncRNA gene	Chr9:29361091-29369638 (+)
C3H/HeJ	ENSMUSG00175019744	lncRNA gene	Chr9:29346868-29355420 (+)
C57BL/6NJ	ENSMUSG00215009277	lncRNA gene	Chr9:29317598-29326145 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004178	antisense lncRNA gene	Chr9:28277074-28285931 (+)
CAST/EiJ	ENSTCUG00005019296	lncRNA gene	Chr9:29315851-29324496 (+)
CBA/J	ENSMUSG00210022111	lncRNA gene	Chr9:29366554-29375088 (+)
DBA/2J	ENSMUSG00185002642	lncRNA gene	Chr9:29417597-29426181 (+)
FVB/NJ	ENSMUSG00205004835	lncRNA gene	Chr9:29720235-29728759 (+)
JF1/MsJ	ENSUMUG00000015544	lncRNA gene	Chr9:29606450-29615034 (+)
LP/J	ENSMUSG00230005520	lncRNA gene	Chr9:29850055-29858638 (+)
NOD/ShiLtJ	ENSMUSG00190006347	lncRNA gene	Chr9:29453196-29461743 (+)
NZO/HlLtJ	ENSMUSG00225014901	lncRNA gene	Chr9:29829828-29838365 (+)
PWK/PhJ	ENSLUMG00010009270	lncRNA gene	Chr9:29461679-29470355 (+)
SPRET/EiJ	ENSMSPG00010002209	lncRNA gene	Chr9:29837195-29845522 (+)
WSB/EiJ	ENSIUOG00005015973	lncRNA gene	Chr9:28896265-28904759 (+)

Homology

• Gene Tree
  Gm27201
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098645 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098645	Ensembl Gene Model | MGI Sequence Detail	8615	C57BL/6J
transcript	ENSMUST00000183818	Ensembl | MGI Sequence Detail	485	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm27201:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr84258	Chr9:32419697-32419728 (+)	19 bp