Gm27196 Gene Detail

Summary

• Symbol
  Gm27196
• Name
  predicted gene 27196

• Feature Type
  lncRNA gene
• IDs
  MGI:5521039
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:26096714-26099295 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5521039	lncRNA gene	Chr2:26096714-26099295 (+)
129S1/SvImJ	ENSMUSG00200053390	lncRNA gene	Chr2:23080810-23083390 (+)
A/J	ENSMUSG00195049587	lncRNA gene	Chr2:23169840-23172420 (+)
AKR/J	ENSMUSG00220053817	lncRNA gene	Chr2:23287643-23290223 (+)
BALB/cJ	ENSMUSG00180054452	lncRNA gene	Chr2:23182620-23185201 (+)
C3H/HeJ	ENSMUSG00175053764	lncRNA gene	Chr2:23152047-23154628 (+)
C57BL/6NJ	ENSMUSG00215050044	lncRNA gene	Chr2:23205503-23208084 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003142	antisense lncRNA gene	Chr2:22106636-22109235 (+)
CAST/EiJ	ENSTCUG00005053315	lncRNA gene	Chr2:22913040-22915621 (+)
CBA/J	ENSMUSG00210017786	lncRNA gene	Chr2:23185706-23188287 (+)
DBA/2J	ENSMUSG00185053958	lncRNA gene	Chr2:23083951-23086531 (+)
FVB/NJ	ENSMUSG00205051436	lncRNA gene	Chr2:22939553-22942134 (+)
JF1/MsJ	ENSUMUG00000056324	lncRNA gene	Chr2:22989727-22992308 (+)
LP/J	ENSMUSG00230045999	lncRNA gene	Chr2:25016773-25019353 (+)
NOD/ShiLtJ	ENSMUSG00190052762	lncRNA gene	Chr2:23176061-23178642 (+)
NZO/HlLtJ	ENSMUSG00225011294	lncRNA gene	Chr2:32753462-32756043 (+)
PWK/PhJ	ENSLUMG00010052599	lncRNA gene	Chr2:23081778-23084359 (+)
SPRET/EiJ	ENSMSPG00010046197	lncRNA gene	Chr2:23770274-23772858 (+)
WSB/EiJ	ENSIUOG00005052978	lncRNA gene	Chr2:23040903-23043484 (+)

Homology

• Gene Tree
  Gm27196
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098977 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098977	Ensembl Gene Model | MGI Sequence Detail	2582	C57BL/6J
transcript	ENSMUST00000184787	Ensembl | MGI Sequence Detail	2582	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm27196:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16779	Chr2:26096687-26096698 (+)	-21 bp