Gm27040 Gene Detail

Summary

• Symbol
  Gm27040
• Name
  predicted gene, 27040

• Feature Type
  lncRNA gene
• IDs
  MGI:5504155
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:123558170-123582691 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  740 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504155	lncRNA gene	Chr7:123558170-123582691 (-)
129S1/SvImJ	ENSMUSG00200022551	lncRNA gene	Chr7:110092458-110104867 (-)
A/J	ENSMUSG00195046050	lncRNA gene	Chr7:114625862-114638256 (-)
AKR/J	ENSMUSG00220029344	lncRNA gene	Chr7:108042565-108054972 (-)
BALB/cJ	ENSMUSG00180035198	lncRNA gene	Chr7:111284467-111296876 (-)
C3H/HeJ	ENSMUSG00175019352	lncRNA gene	Chr7:111997465-112009880 (-)
C57BL/6NJ	ENSMUSG00215042326	lncRNA gene	Chr7:111274714-111287127 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004073	antisense lncRNA gene	Chr7:126055678-126068699 (-)
CAST/EiJ	ENSTCUG00005049728	lncRNA gene	Chr7:114531477-114544627 (-)
CBA/J	ENSMUSG00210023844	lncRNA gene	Chr7:111758528-111770942 (-)
DBA/2J	ENSMUSG00185050773	lncRNA gene	Chr7:116071455-116083871 (-)
FVB/NJ	ENSMUSG00205044482	lncRNA gene	Chr7:111731745-111744156 (-)
JF1/MsJ	ENSUMUG00000051121	lncRNA gene	Chr7:121135155-121147619 (-)
LP/J	ENSMUSG00230053160	lncRNA gene	Chr7:122180123-122192531 (-)
NOD/ShiLtJ	ENSMUSG00190019830	lncRNA gene	Chr7:111918749-111931162 (-)
NZO/HlLtJ	ENSMUSG00225040105	lncRNA gene	Chr7:120422055-120434460 (-)
PWK/PhJ	ENSLUMG00010013653	lncRNA gene	Chr7:110264949-110277365 (-)
SPRET/EiJ	ENSMSPG00010013302	lncRNA gene	Chr7:111510649-111522821 (-)
WSB/EiJ	ENSIUOG00005033097	lncRNA gene	Chr7:112615755-112628158 (-)

Homology

• Gene Tree
  Gm27040
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000098129 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098129	Ensembl Gene Model | MGI Sequence Detail	24522	C57BL/6J
transcript	ENSMUST00000194314	Ensembl | MGI Sequence Detail	1486	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;