Gm27030 Gene Detail

Summary

• Symbol
  Gm27030
• Name
  predicted gene, 27030

• Feature Type
  lncRNA gene
• IDs
  MGI:5504145
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:122379894-122385099 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504145	lncRNA gene	Chr8:122379894-122385099 (+)
129S1/SvImJ	ENSMUSG00200043749	lncRNA gene	Chr8:116716903-116717366 (+)
A/J	ENSMUSG00195027736	lncRNA gene	Chr8:117008493-117008956 (+)
AKR/J	ENSMUSG00220043165	lncRNA gene	Chr8:117198730-117199193 (+)
BALB/cJ	ENSMUSG00180028949	lncRNA gene	Chr8:117054250-117054713 (+)
C3H/HeJ	ENSMUSG00175032427	lncRNA gene	Chr8:117110539-117111002 (+)
C57BL/6NJ	ENSMUSG00215034591	lncRNA gene	Chr8:116684757-116685220 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006734	lincRNA gene	Chr8:112811920-112812397 (+)
CAST/EiJ	ENSTCUG00005036288	lncRNA gene	Chr8:116445682-116446145 (+)
CBA/J	ENSMUSG00210039839	lncRNA gene	Chr8:117038152-117038615 (+)
DBA/2J	ENSMUSG00185037209	lncRNA gene	Chr8:123142226-123142689 (+)
FVB/NJ	ENSMUSG00205040865	lncRNA gene	Chr8:116011576-116012039 (+)
JF1/MsJ	ENSUMUG00000039902	lncRNA gene	Chr8:125446966-125447429 (+)
LP/J	ENSMUSG00230031893	lncRNA gene	Chr8:126770088-126770551 (+)
NOD/ShiLtJ	ENSMUSG00190022277	lncRNA gene	Chr8:117145937-117146400 (+)
NZO/HlLtJ	ENSMUSG00225044186	lncRNA gene	Chr8:130142677-130143140 (+)
PWK/PhJ	ENSLUMG00010039146	lncRNA gene	Chr8:116854108-116854571 (+)
SPRET/EiJ	ENSMSPG00010040011	lncRNA gene	Chr8:119052452-119052910 (+)
WSB/EiJ	ENSIUOG00005031463	lncRNA gene	Chr8:117847534-117847997 (+)

Homology

• Gene Tree
  Gm27030
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000098221 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098221	Ensembl Gene Model | MGI Sequence Detail	5206	C57BL/6J
transcript	ENSMUST00000287886	Ensembl | MGI Sequence Detail	599	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14