Gm27022 Gene Detail

Summary

• Symbol
  Gm27022
• Name
  predicted gene, 27022

• Feature Type
  lncRNA gene
• IDs
  MGI:5504137
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:136075158-136076752 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504137	lncRNA gene	Chr4:136075158-136076752 (-)
129S1/SvImJ	ENSMUSG00200021408	lncRNA gene	Chr4:129492077-129493724 (-)
A/J	ENSMUSG00195045234	lncRNA gene	Chr4:130841815-130843400 (-)
AKR/J	ENSMUSG00220047844	lncRNA gene	Chr4:129835945-129837530 (-)
BALB/cJ	ENSMUSG00180050577	lncRNA gene	Chr4:128475424-128477007 (-)
C3H/HeJ	ENSMUSG00175048087	lncRNA gene	Chr4:129495176-129496761 (-)
C57BL/6NJ	ENSMUSG00215052673	lncRNA gene	Chr4:131015289-131016883 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005945	lincRNA gene	Chr4:126020157-126021734 (-)
CAST/EiJ	ENSTCUG00005048744	lncRNA gene	Chr4:130422455-130424046 (-)
CBA/J	ENSMUSG00210053979	lncRNA gene	Chr4:129119084-129120669 (-)
DBA/2J	ENSMUSG00185053564	lncRNA gene	Chr4:130648747-130650330 (-)
FVB/NJ	ENSMUSG00205049251	lncRNA gene	Chr4:128892203-128893786 (-)
JF1/MsJ	ENSUMUG00000048735	lncRNA gene	Chr4:131348388-131350041 (-)
LP/J	ENSMUSG00230041883	lncRNA gene	Chr4:134430277-134431924 (-)
NOD/ShiLtJ	ENSMUSG00190049026	lncRNA gene	Chr4:128880864-128882447 (-)
NZO/HlLtJ	ENSMUSG00225027070	lncRNA gene	Chr4:140385233-140386880 (-)
PWK/PhJ	ENSLUMG00010051247	lncRNA gene	Chr4:128331689-128333274 (-)
SPRET/EiJ	ENSMSPG00010046101	lncRNA gene	Chr4:130408843-130410471 (-)
WSB/EiJ	ENSIUOG00005045266	lncRNA gene	Chr4:128783676-128785259 (-)

Homology

• Gene Tree
  Gm27022
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Targeted
  1
• Genomic Mutations
  3 involving Gm27022
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098155 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098155	Ensembl Gene Model | MGI Sequence Detail	1595	C57BL/6J
transcript	ENSMUST00000183225	Ensembl | MGI Sequence Detail	715	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8