Gm27010 Gene Detail

Summary

• Symbol
  Gm27010
• Name
  predicted gene, 27010

• Feature Type
  lncRNA gene
• IDs
  MGI:5504125
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:61863375-61864786 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504125	lncRNA gene	Chr14:61863375-61864786 (-)
129S1/SvImJ	ENSMUSG00200043269	lncRNA gene	Chr14:50454991-50456404 (-)
A/J	ENSMUSG00195038007	lncRNA gene	Chr14:50638650-50640061 (-)
AKR/J	ENSMUSG00220035392	lncRNA gene	Chr14:49985899-49987310 (-)
BALB/cJ	ENSMUSG00180053440	lncRNA gene	Chr14:50260569-50261980 (-)
C3H/HeJ	ENSMUSG00175038322	lncRNA gene	Chr14:51990858-51992270 (-)
C57BL/6NJ	ENSMUSG00215050863	lncRNA gene	Chr14:50190255-50191666 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005047	lincRNA gene	Chr14:52766748-52767955 (-)
CAST/EiJ	ENSTCUG00005040938	lncRNA gene	Chr14:51899036-51900251 (-)
CBA/J	ENSMUSG00210048080	lncRNA gene	Chr14:50626648-50628059 (-)
DBA/2J	ENSMUSG00185032329	lncRNA gene	Chr14:55788598-55790010 (-)
FVB/NJ	ENSMUSG00205045282	lncRNA gene	Chr14:50145601-50147012 (-)
JF1/MsJ	ENSUMUG00000051374	lncRNA gene	Chr14:66977030-66978245 (-)
LP/J	ENSMUSG00230037361	lncRNA gene	Chr14:67818213-67819625 (-)
NOD/ShiLtJ	ENSMUSG00190048857	lncRNA gene	Chr14:50423036-50424447 (-)
NZO/HlLtJ	ENSMUSG00225047495	lncRNA gene	Chr14:58164620-58166031 (-)
PWK/PhJ	ENSLUMG00010050459	lncRNA gene	Chr14:49875930-49877341 (-)
SPRET/EiJ	ENSMSPG00010035259	lncRNA gene	Chr14:53281029-53282244 (-)
WSB/EiJ	ENSIUOG00005045061	lncRNA gene	Chr14:49858218-49859631 (-)

Homology

• Gene Tree
  Gm27010
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Targeted
  3
• Genomic Mutations
  4 involving Gm27010
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098183 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098183	Ensembl Gene Model | MGI Sequence Detail	1412	C57BL/6J
transcript	ENSMUST00000182727	Ensembl | MGI Sequence Detail	863	Not Applicable

References

• Summaries
  All 9

  Diseases 2

  Phenotypes 7
• Earliest
  J:156946 Klein U, et al., The DLEU2/miR-15a/16-1 Cluster Controls B Cell Proliferation and Its Deletion Leads to Chronic Lymphocytic Leukemia. Cancer Cell. 2010 Jan 19;17(1):28-40
• Latest
  J:317184 Chesi M, et al., Monosomic loss of MIR15A/MIR16-1 is a driver of multiple myeloma proliferation and disease progression. Blood Cancer Discov. 2020 Jul;1(1):68-81

TSS for Gm27010:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129091	Chr14:61864371-61864372 (-)	414 bp