Gm27001 Pseudogene Detail

Summary

• Symbol
  Gm27001
• Name
  predicted gene, 27001

• Feature Type
  pseudogene
• IDs
  MGI:5504116
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:60448971-60449906 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  172 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504116	pseudogene	Chr16:60448971-60449906 (+)
129S1/SvImJ	ENSMUSG00200021255	pseudogene	Chr16:57418233-57419168 (+)
A/J	ENSMUSG00195025313	pseudogene	Chr16:57017595-57018530 (+)
AKR/J	ENSMUSG00220019732	pseudogene	Chr16:57362717-57363652 (+)
BALB/cJ	ENSMUSG00180023915	pseudogene	Chr16:57188034-57188969 (+)
C3H/HeJ	ENSMUSG00175017815	pseudogene	Chr16:57442074-57443009 (+)
C57BL/6NJ	ENSMUSG00215023220	pseudogene	Chr16:57268021-57268956 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010123	pseudogene	Chr16:56793644-56794547 (+)
CAST/EiJ	ENSTCUG00005014194	pseudogene	Chr16:57409403-57410349 (+)
CBA/J	ENSMUSG00210019629	pseudogene	Chr16:57418104-57419039 (+)
DBA/2J	ENSMUSG00185025643	pseudogene	Chr16:57365361-57366296 (+)
FVB/NJ	ENSMUSG00205010494	pseudogene	Chr16:57146299-57147234 (+)
JF1/MsJ	ENSUMUG00000028052	pseudogene	Chr16:57562680-57563626 (+)
LP/J	ENSMUSG00230008857	pseudogene	Chr16:59919394-59920329 (+)
NOD/ShiLtJ	ENSMUSG00190007397	pseudogene	Chr16:57365724-57366659 (+)
NZO/HlLtJ	ENSMUSG00225036012	pseudogene	Chr16:62990944-62991879 (+)
PWK/PhJ	ENSLUMG00010011905	pseudogene	Chr16:57242258-57243204 (+)
SPRET/EiJ	ENSMSPG00010001683	pseudogene	Chr16:57895943-57896877 (+)
WSB/EiJ	ENSIUOG00005009482	pseudogene	Chr16:57522319-57523254 (+)

Homology

• Gene Tree
  Gm27001
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000097963 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097963	Ensembl Gene Model | MGI Sequence Detail	936	C57BL/6J
transcript	ENSMUST00000182252	Ensembl | MGI Sequence Detail	936	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;