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Gm27000 Gene Detail
Summary
  • Symbol
    Gm27000
  • Name
    predicted gene, 27000
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5504115
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:87803077-87803918 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    124 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5504115
 lncRNA gene ChrX:87803077-87803918 (-)
129S1/SvImJ ENSMUSG00200032408
 lncRNA gene ChrX:69812045-69812886 (-)
A/J ENSMUSG00195031977
 lncRNA gene ChrX:73533567-73534408 (-)
AKR/J ENSMUSG00220029458
 lncRNA gene ChrX:68424662-68425503 (-)
BALB/cJ ENSMUSG00180024281
 lncRNA gene ChrX:70084379-70085220 (-)
C3H/HeJ ENSMUSG00175019231
 lncRNA gene ChrX:73714167-73715008 (-)
C57BL/6NJ ENSMUSG00215018847
 lncRNA gene ChrX:70232301-70233142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004913
 lincRNA gene Chr12:103992391-103993312 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210025747
 lncRNA gene ChrX:70428982-70429823 (-)
DBA/2J ENSMUSG00185033260
 lncRNA gene ChrX:82771825-82772666 (-)
FVB/NJ ENSMUSG00205019296
 lncRNA gene ChrX:69739466-69740307 (-)
JF1/MsJ ENSUMUG00000022094
 lncRNA gene ChrX:103575945-103576402 (-)
LP/J ENSMUSG00230010611
 lncRNA gene ChrX:89418824-89419665 (-)
NOD/ShiLtJ ENSMUSG00190024957
 lncRNA gene ChrX:69779994-69780835 (-)
NZO/HlLtJ ENSMUSG00225046144
 lncRNA gene ChrX:94562141-94562982 (-)
PWK/PhJ ENSLUMG00010034797
 lncRNA gene ChrX:69244117-69244574 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005042678
 lncRNA gene ChrX:70337204-70338045 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097961 Ensembl Gene Model | MGI Sequence Detail 842 C57BL/6J ±  kb
transcript ENSMUST00000182943 Ensembl | MGI Sequence Detail 842 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 3
    Gene Ontology 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory