Gm26988 Pseudogene Detail

Summary

• Symbol
  Gm26988
• Name
  predicted gene, 26988

• Feature Type
  pseudogene
• IDs
  MGI:5504103
  NCBI Gene: 102637281
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:102296059-102297003 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504103	pseudogene	Chr10:102296059-102297003 (+)
129S1/SvImJ	ENSMUSG00200020297	pseudogene	Chr10:98782329-98783273 (+)
A/J	ENSMUSG00195017732	pseudogene	Chr10:99213927-99214871 (+)
AKR/J	ENSMUSG00220026103	pseudogene	Chr10:98760587-98761531 (+)
BALB/cJ	ENSMUSG00180010215	pseudogene	Chr10:99221168-99222112 (+)
C3H/HeJ	ENSMUSG00175006124	pseudogene	Chr10:99102536-99103480 (+)
C57BL/6NJ	ENSMUSG00215007541	pseudogene	Chr10:98815255-98816199 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009448	pseudogene	Chr10:95890475-95891418 (+)
CAST/EiJ	ENSTCUG00005006335	pseudogene	Chr10:98385940-98386865 (+)
CBA/J	ENSMUSG00210023078	pseudogene	Chr10:98993468-98994412 (+)
DBA/2J	ENSMUSG00185019316	pseudogene	Chr10:99163381-99164325 (+)
FVB/NJ	ENSMUSG00205004101	pseudogene	Chr10:98639605-98640549 (+)
JF1/MsJ	ENSUMUG00000031825	pseudogene	Chr10:100583186-100584132 (+)
LP/J	ENSMUSG00230013593	pseudogene	Chr10:101081590-101082534 (+)
NOD/ShiLtJ	ENSMUSG00190028414	pseudogene	Chr10:99267679-99268623 (+)
NZO/HlLtJ	ENSMUSG00225040921	pseudogene	Chr10:105312788-105313732 (+)
PWK/PhJ	ENSLUMG00010006168	pseudogene	Chr10:98848345-98849276 (+)
SPRET/EiJ	ENSMSPG00010010743	pseudogene	Chr10:100625983-100626927 (+)
WSB/EiJ	ENSIUOG00005013668	pseudogene	Chr10:98917482-98918426 (+)

Homology

• Gene Tree
  Gm26988
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26988
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098139 (Evidence)
• NCBI Gene
  102637281

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098139	Ensembl Gene Model | MGI Sequence Detail	945	C57BL/6J
transcript	ENSMUST00000183296	Ensembl | MGI Sequence Detail	945	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87